新型2-氨基噻唑-4(5H)- 1衍生物作为11β - HSD1抑制剂的计算QSAR研究

IF 3.1 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Katarzyna Mądra-Gackowska, Szymon Baumgart, Mateusz Jędrzejewski, Renata Studzińska, Łukasz Szeleszczuk, Marcin Gackowski
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引用次数: 0

摘要

本研究旨在建立一个预测模型,支持基于假硫代氢嘌呤支架的新型11β-羟基类固醇脱氢酶1型(11β-HSD1)抑制剂的设计,为代谢紊乱的新治疗提供可能。对56个2-氨基噻唑-4(5h)- 1衍生物进行定量构效关系(QSAR)分析,这些衍生物具有11β-HSD1抑制活性。采用Gaussian软件进行几何优化,Dragon软件计算分子描述符。该研究使用人工神经网络(ANN)算法对前十名预选描述符与研究类似物活性之间的回归分析。采用10-11-1网络结构,采用Broyden-Fletcher-Goldfarb-Shanno学习算法建立预测模型。通过交叉验证和y随机化策略来支持模型的可靠性。模型具有较高的准确度,决定系数(R2)为0.9482,内部验证的交叉验证R2 (Q2)为0.9944,证实了模型的效度。利用3类三维描述符(escape、3D- morse和RDF描述符)和4组拓扑指标(GALVEZ、2D自相关、2D矩阵描述符和Burden特征值)生成QSAR模型。应用所建立的模型预测了设计的4个2-氨基噻唑-4(5h)- 1衍生物的11β-HSD1抑制活性,表明在氨基上取代环己基和2-(四氢- 2h -吡喃-2-基)甲基残基以及噻唑环C-5上取代基的化合物可能是未来化学合成和生物学评价的潜在候选物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Computational QSAR study of novel 2-aminothiazol-4(5H)-one derivatives as 11β‐HSD1 inhibitors

This research aims to develop a predictive model to support the design of new 11β-hydroxysteroid dehydrogenase type 1 (11β-HSD1) inhibitors based on the pseudothiohydantoin scaffold, offering potential for novel treatments of metabolic disorders. The Quantitative Structure–Activity Relationship (QSAR) analysis was performed on 56 2-aminothiazol-4(5h)-one derivatives, for which the 11β-HSD1 inhibitory activity was previously reported. Gaussian software was employed for geometry optimization, while Dragon software was used to calculate the molecular descriptors. The study used an Artificial Neural Network (ANN) algorithm for regression analysis between the top ten preselected descriptors and the activity of the studied analogs. A predictive model was developed using a network architecture 10-11-1 with a Broyden–Fletcher–Goldfarb–Shanno learning algorithm. The model’s reliability was supported through cross-validation and y-randomization strategies. The model exhibited high accuracy with a determination coefficient (R2) of 0.9482, and its validity was confirmed through internal validation with a cross-validated R2 (Q2) of 0.9944. Three classes of 3D descriptors (GETAWAY, 3D-MoRSE, and RDF descriptors) and four groups of topological indices (GALVEZ, 2D autocorrelations, 2D matrix-based descriptors, and Burden eigenvalues) were used to generate the QSAR model. The developed model was applied to predict the 11β-HSD1 inhibitory activity of four designed series of 2-aminothiazol-4(5h)-one derivatives, suggesting that compounds with cyclohexyl and 2-(tetrahydro-2H-pyran-2-yl)methyl residues substituted at the amino group, and various substituents at C-5 of the thiazole ring, could be potential candidates for upcoming chemical synthesis and biological assessment.

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来源期刊
Journal of Computer-Aided Molecular Design
Journal of Computer-Aided Molecular Design 生物-计算机:跨学科应用
CiteScore
8.00
自引率
8.60%
发文量
56
审稿时长
3 months
期刊介绍: The Journal of Computer-Aided Molecular Design provides a form for disseminating information on both the theory and the application of computer-based methods in the analysis and design of molecules. The scope of the journal encompasses papers which report new and original research and applications in the following areas: - theoretical chemistry; - computational chemistry; - computer and molecular graphics; - molecular modeling; - protein engineering; - drug design; - expert systems; - general structure-property relationships; - molecular dynamics; - chemical database development and usage.
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