建立新的胰腺腺癌预后模型预测预后并指导免疫治疗。

IF 1.7 4区 医学 Q3 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Chaoqian Zhu, Peng Peng, Yuanguang Liu, Yichao Zhao, Ran Cheng, Yang Liu, Jun Yin
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引用次数: 0

摘要

胰腺腺癌(PAAD)仍然是最致命的恶性肿瘤之一,预后差,治疗方案有限。本研究旨在探讨丁酸代谢相关基因(BMRGs)在PAAD中的作用,以改善诊断和预后策略。该研究基于基因表达Omnibus (GEO)和癌症基因组图谱(TCGA)数据库中获得的转录组学和临床数据分析了PAAD。通过构建蛋白-蛋白相互作用(PPI)网络和LASSO Cox回归,选择特征基因,建立与丁酸盐代谢(BMRS)相关的风险模型。该模型有效地将患者分为高BMRS组和低BMRS组。Kaplan-Meier (K-M)分析显示两组患者的总生存率有显著差异。包括临床特征和BMRS在内的ROC曲线和nomogram显示出较强的预测能力。功能富集分析(包括基因本体(GO)和京都基因与基因组百科全书(KEGG))揭示了关键途径,如胰腺分泌和免疫相关过程。此外,两组BMRS均表现出不同的免疫细胞浸润模式,并通过药物敏感性预测确定了几种潜在的治疗药物。共表达网络分析进一步揭示了与角化和核小体组装等生物过程相关的20个基因。总之,本研究强调了BMRGs在PAAD中的临床意义,并为风险分层和个性化治疗的潜在靶点提供了新的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Construction of a novel prognostic model for pancreatic adenocarcinoma to predict prognosis and guide immunotherapy.

Pancreatic adenocarcinoma (PAAD) remains one of the most lethal malignant tumors, with poor prognosis and limited treatment options. This study aims to explore the role of butyrate metabolism-related genes (BMRGs) in PAAD to improve diagnostic and prognostic strategies. The study analyzed PAAD based on transcriptomic and clinical data obtained from the Gene Expression Omnibus (GEO) and The Cancer Genome Atlas (TCGA) databases. Through the construction of protein-protein interaction (PPI) networks and LASSO Cox regression, characteristic genes were selected to develop a risk model related to butyrate metabolism (BMRS). This model effectively divided patients into high BMRS and low BMRS groups. Kaplan-Meier (K-M) analysis showed a significant difference in overall survival rates between the two groups. ROC curves and nomograms including clinical features and BMRS demonstrated strong predictive capabilities. Functional enrichment analysis (including Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG)) revealed key pathways, such as pancreatic secretion and immune-related processes. Additionally, the two BMRS groups showed different immune cell infiltration patterns, and several potential therapeutic drugs were determined through drug sensitivity prediction. Co-expression network analysis further revealed 20 genes related to biological processes such as keratinization and nucleosome assembly. In summary, this study highlights the clinical significance of BMRGs in PAAD and provides new insights into risk stratification and potential targets for personalized treatment.

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来源期刊
CiteScore
4.10
自引率
6.20%
发文量
179
审稿时长
4-8 weeks
期刊介绍: The primary aims of Computer Methods in Biomechanics and Biomedical Engineering are to provide a means of communicating the advances being made in the areas of biomechanics and biomedical engineering and to stimulate interest in the continually emerging computer based technologies which are being applied in these multidisciplinary subjects. Computer Methods in Biomechanics and Biomedical Engineering will also provide a focus for the importance of integrating the disciplines of engineering with medical technology and clinical expertise. Such integration will have a major impact on health care in the future.
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