基于氮代谢相关基因的喉癌患者预后预测。

IF 1.7 4区 医学 Q3 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Yifang Wang, Tianping Shen, Yan Wang
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引用次数: 0

摘要

背景:氮代谢在癌症进展中起着至关重要的作用。本研究旨在利用氮代谢相关基因(NMRGs)构建喉癌(LC)预后模型。方法:从公共数据库和文献中鉴定LC的核磁共振图。通过回归分析构建预后模型,并进行差异分析和富集分析,探索差异表达基因(DEGs)及其功能意义。评估危险组之间的免疫细胞差异,并使用TCGA数据分析基因突变。对不同风险人群进行药物敏感性预测。结果:共鉴定出203个nmrg,其中8个基因用于风险评分模型。富集分析显示,高危组(993个基因)中的deg与神经活性配体-受体相互作用和钙信号传导等过程有关。免疫分析显示,低危组活化NK细胞和CD4+ T细胞浸润较多,高危组CD8+ T细胞和巨噬细胞浸润较多。药物敏感性分析确定KIN001-135、苯双胍和吉西他滨是潜在的治疗方法。结论:氮代谢与LC预后密切相关,基于nmrg的模型可有效区分不同免疫景观和药物敏感性的风险群体。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Prognostic prediction of laryngeal cancer patients based on nitrogen metabolism-related genes.

Background: Nitrogen metabolism plays a crucial role in cancer progression. This study aimed to construct a prognostic model using nitrogen metabolism-related genes (NMRGs) for laryngeal cancer (LC).

Methods: NMRGs for LC were identified from public databases and literature. A prognostic model was constructed through regression analysis, and differential and enrichment analyses were performed to explore differentially expressed genes (DEGs) and their functional implications. Immune cell differences between risk groups were assessed, and gene mutations were analyzed using TCGA data. Drug sensitivity predictions for different risk groups were also conducted.

Results: A total of 203 NMRGs were identified, leading to eight genes used in a risk-scoring model. Enrichment analysis showed that DEGs in the high-risk group (993 genes) were linked to processes like neuroactive ligand-receptor interaction and calcium signaling. Immune analysis revealed high infiltration of activated NK cells and CD4+ T cells in the low-risk group, while CD8+ T cells and macrophages were prominent in the high-risk group. Drug sensitivity analysis identified KIN001-135, Phenformin, and Gemcitabine as potential treatments.

Conclusion: Nitrogen metabolism is closely related to LC prognosis, and the NMRG-based model effectively distinguishes risk groups with distinct immune landscapes and drug sensitivities.

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来源期刊
CiteScore
4.10
自引率
6.20%
发文量
179
审稿时长
4-8 weeks
期刊介绍: The primary aims of Computer Methods in Biomechanics and Biomedical Engineering are to provide a means of communicating the advances being made in the areas of biomechanics and biomedical engineering and to stimulate interest in the continually emerging computer based technologies which are being applied in these multidisciplinary subjects. Computer Methods in Biomechanics and Biomedical Engineering will also provide a focus for the importance of integrating the disciplines of engineering with medical technology and clinical expertise. Such integration will have a major impact on health care in the future.
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