Andre Niyongabo Rubungo, Craig Arnold, Barry P. Rand, Adji Bousso Dieng
{"title":"LLM-Prop:使用大型语言模型预测晶体材料的性质","authors":"Andre Niyongabo Rubungo, Craig Arnold, Barry P. Rand, Adji Bousso Dieng","doi":"10.1038/s41524-025-01536-2","DOIUrl":null,"url":null,"abstract":"<p>The prediction of crystal properties plays a crucial role in materials science and applications. Current methods for predicting crystal properties focus on modeling crystal structures using graph neural networks (GNNs). However, accurately modeling the complex interactions between atoms and molecules within a crystal remains a challenge. Surprisingly, predicting crystal properties from crystal text descriptions is understudied, despite the rich information and expressiveness that text data offer. In this paper, we develop and make public a benchmark dataset (TextEdge) that contains crystal text descriptions with their properties. We then propose LLM-Prop, a method that leverages the general-purpose learning capabilities of large language models (LLMs) to predict properties of crystals from their text descriptions. LLM-Prop outperforms the current state-of-the-art GNN-based methods by approximately 8% on predicting band gap, 3% on classifying whether the band gap is direct or indirect, and 65% on predicting unit cell volume, and yields comparable performance on predicting formation energy per atom, energy per atom, and energy above hull. LLM-Prop also outperforms the fine-tuned MatBERT, a domain-specific pre-trained BERT model, despite having 3 times fewer parameters. We further fine-tune the LLM-Prop model directly on CIF files and condensed structure information generated by Robocrystallographer and found that LLM-Prop fine-tuned on text descriptions provides a better performance on average. Our empirical results highlight the importance of having a natural language input to LLMs to accurately predict crystal properties and the current inability of GNNs to capture information pertaining to space group symmetry and Wyckoff sites for accurate crystal property prediction.</p>","PeriodicalId":19342,"journal":{"name":"npj Computational Materials","volume":"12 1","pages":""},"PeriodicalIF":9.4000,"publicationDate":"2025-06-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"LLM-Prop: predicting the properties of crystalline materials using large language models\",\"authors\":\"Andre Niyongabo Rubungo, Craig Arnold, Barry P. Rand, Adji Bousso Dieng\",\"doi\":\"10.1038/s41524-025-01536-2\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>The prediction of crystal properties plays a crucial role in materials science and applications. Current methods for predicting crystal properties focus on modeling crystal structures using graph neural networks (GNNs). However, accurately modeling the complex interactions between atoms and molecules within a crystal remains a challenge. Surprisingly, predicting crystal properties from crystal text descriptions is understudied, despite the rich information and expressiveness that text data offer. In this paper, we develop and make public a benchmark dataset (TextEdge) that contains crystal text descriptions with their properties. We then propose LLM-Prop, a method that leverages the general-purpose learning capabilities of large language models (LLMs) to predict properties of crystals from their text descriptions. LLM-Prop outperforms the current state-of-the-art GNN-based methods by approximately 8% on predicting band gap, 3% on classifying whether the band gap is direct or indirect, and 65% on predicting unit cell volume, and yields comparable performance on predicting formation energy per atom, energy per atom, and energy above hull. LLM-Prop also outperforms the fine-tuned MatBERT, a domain-specific pre-trained BERT model, despite having 3 times fewer parameters. We further fine-tune the LLM-Prop model directly on CIF files and condensed structure information generated by Robocrystallographer and found that LLM-Prop fine-tuned on text descriptions provides a better performance on average. Our empirical results highlight the importance of having a natural language input to LLMs to accurately predict crystal properties and the current inability of GNNs to capture information pertaining to space group symmetry and Wyckoff sites for accurate crystal property prediction.</p>\",\"PeriodicalId\":19342,\"journal\":{\"name\":\"npj Computational Materials\",\"volume\":\"12 1\",\"pages\":\"\"},\"PeriodicalIF\":9.4000,\"publicationDate\":\"2025-06-18\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"npj Computational Materials\",\"FirstCategoryId\":\"88\",\"ListUrlMain\":\"https://doi.org/10.1038/s41524-025-01536-2\",\"RegionNum\":1,\"RegionCategory\":\"材料科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"npj Computational Materials","FirstCategoryId":"88","ListUrlMain":"https://doi.org/10.1038/s41524-025-01536-2","RegionNum":1,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
LLM-Prop: predicting the properties of crystalline materials using large language models
The prediction of crystal properties plays a crucial role in materials science and applications. Current methods for predicting crystal properties focus on modeling crystal structures using graph neural networks (GNNs). However, accurately modeling the complex interactions between atoms and molecules within a crystal remains a challenge. Surprisingly, predicting crystal properties from crystal text descriptions is understudied, despite the rich information and expressiveness that text data offer. In this paper, we develop and make public a benchmark dataset (TextEdge) that contains crystal text descriptions with their properties. We then propose LLM-Prop, a method that leverages the general-purpose learning capabilities of large language models (LLMs) to predict properties of crystals from their text descriptions. LLM-Prop outperforms the current state-of-the-art GNN-based methods by approximately 8% on predicting band gap, 3% on classifying whether the band gap is direct or indirect, and 65% on predicting unit cell volume, and yields comparable performance on predicting formation energy per atom, energy per atom, and energy above hull. LLM-Prop also outperforms the fine-tuned MatBERT, a domain-specific pre-trained BERT model, despite having 3 times fewer parameters. We further fine-tune the LLM-Prop model directly on CIF files and condensed structure information generated by Robocrystallographer and found that LLM-Prop fine-tuned on text descriptions provides a better performance on average. Our empirical results highlight the importance of having a natural language input to LLMs to accurately predict crystal properties and the current inability of GNNs to capture information pertaining to space group symmetry and Wyckoff sites for accurate crystal property prediction.
期刊介绍:
npj Computational Materials is a high-quality open access journal from Nature Research that publishes research papers applying computational approaches for the design of new materials and enhancing our understanding of existing ones. The journal also welcomes papers on new computational techniques and the refinement of current approaches that support these aims, as well as experimental papers that complement computational findings.
Some key features of npj Computational Materials include a 2-year impact factor of 12.241 (2021), article downloads of 1,138,590 (2021), and a fast turnaround time of 11 days from submission to the first editorial decision. The journal is indexed in various databases and services, including Chemical Abstracts Service (ACS), Astrophysics Data System (ADS), Current Contents/Physical, Chemical and Earth Sciences, Journal Citation Reports/Science Edition, SCOPUS, EI Compendex, INSPEC, Google Scholar, SCImago, DOAJ, CNKI, and Science Citation Index Expanded (SCIE), among others.