{"title":"费芦氨酸生物合成基因簇的异源表达及单DMATS酶对环(l-Trp-l-Trp)双戊酰化的表征","authors":"Wei-Peng Chen, Wei Lin, Wei Chen, Shu-Zhen Chen, Jian-Bin Xiao, Xing-Tong Chen, Chao Chen, Fan Cai, Ming-Liang Zhang, Qin Li, Huai-Dong Zhang, Li Li, Hui Zhang","doi":"10.1021/acs.jnatprod.4c01116","DOIUrl":null,"url":null,"abstract":"<p><p>2,5-Diketopiperazines (2,5-DKPs) are recognized for their structural rigidity and diverse bioactivities, making them significant in drug discovery. However, the stereochemical complexity of 2,5-DKPs presents challenges in chemical synthesis, particularly concerning indole derivatives such as indole diketopiperazines (IDKPs). Prenylation and oxidation further diversify these structures, enhancing their bioactivity and membrane affinity. Despite recent advances, the biosynthetic pathways of IDKPs, especially those involving dual prenylation, remain inadequately understood. In this study, the fellutanine biosynthetic gene cluster from <i>Nannizzia fulva</i> was cloned and heterologously expressed in <i>Aspergillus nidulans</i>. A partially oxidized intermediate in the fellutanine biosynthetic pathway was characterized. The dimethylallyl tryptophan synthase (DMATS) enzyme FelB was shown to catalyze consecutive prenylations at two C-2 positions of cyclo(l-Trp-l-Trp) in both in vivo and in vitro assays. Additionally, comparative studies with the known DMATS enzyme OkaC revealed differences in the regioselectivity. Furthermore, the biprenylation mechanism of FelB and OkaC was elucidated through molecular docking and active site analysis.</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":" ","pages":"1111-1119"},"PeriodicalIF":3.3000,"publicationDate":"2025-05-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Heterologous Expression of the Fellutanine Biosynthetic Gene Cluster and Characterization of the Dual Prenylation of cyclo(l-Trp-l-Trp) by a Single DMATS Enzyme.\",\"authors\":\"Wei-Peng Chen, Wei Lin, Wei Chen, Shu-Zhen Chen, Jian-Bin Xiao, Xing-Tong Chen, Chao Chen, Fan Cai, Ming-Liang Zhang, Qin Li, Huai-Dong Zhang, Li Li, Hui Zhang\",\"doi\":\"10.1021/acs.jnatprod.4c01116\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>2,5-Diketopiperazines (2,5-DKPs) are recognized for their structural rigidity and diverse bioactivities, making them significant in drug discovery. However, the stereochemical complexity of 2,5-DKPs presents challenges in chemical synthesis, particularly concerning indole derivatives such as indole diketopiperazines (IDKPs). Prenylation and oxidation further diversify these structures, enhancing their bioactivity and membrane affinity. Despite recent advances, the biosynthetic pathways of IDKPs, especially those involving dual prenylation, remain inadequately understood. In this study, the fellutanine biosynthetic gene cluster from <i>Nannizzia fulva</i> was cloned and heterologously expressed in <i>Aspergillus nidulans</i>. A partially oxidized intermediate in the fellutanine biosynthetic pathway was characterized. The dimethylallyl tryptophan synthase (DMATS) enzyme FelB was shown to catalyze consecutive prenylations at two C-2 positions of cyclo(l-Trp-l-Trp) in both in vivo and in vitro assays. Additionally, comparative studies with the known DMATS enzyme OkaC revealed differences in the regioselectivity. Furthermore, the biprenylation mechanism of FelB and OkaC was elucidated through molecular docking and active site analysis.</p>\",\"PeriodicalId\":47,\"journal\":{\"name\":\"Journal of Natural Products \",\"volume\":\" \",\"pages\":\"1111-1119\"},\"PeriodicalIF\":3.3000,\"publicationDate\":\"2025-05-23\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Natural Products \",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1021/acs.jnatprod.4c01116\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/4/27 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, MEDICINAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Natural Products ","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1021/acs.jnatprod.4c01116","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/4/27 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
Heterologous Expression of the Fellutanine Biosynthetic Gene Cluster and Characterization of the Dual Prenylation of cyclo(l-Trp-l-Trp) by a Single DMATS Enzyme.
2,5-Diketopiperazines (2,5-DKPs) are recognized for their structural rigidity and diverse bioactivities, making them significant in drug discovery. However, the stereochemical complexity of 2,5-DKPs presents challenges in chemical synthesis, particularly concerning indole derivatives such as indole diketopiperazines (IDKPs). Prenylation and oxidation further diversify these structures, enhancing their bioactivity and membrane affinity. Despite recent advances, the biosynthetic pathways of IDKPs, especially those involving dual prenylation, remain inadequately understood. In this study, the fellutanine biosynthetic gene cluster from Nannizzia fulva was cloned and heterologously expressed in Aspergillus nidulans. A partially oxidized intermediate in the fellutanine biosynthetic pathway was characterized. The dimethylallyl tryptophan synthase (DMATS) enzyme FelB was shown to catalyze consecutive prenylations at two C-2 positions of cyclo(l-Trp-l-Trp) in both in vivo and in vitro assays. Additionally, comparative studies with the known DMATS enzyme OkaC revealed differences in the regioselectivity. Furthermore, the biprenylation mechanism of FelB and OkaC was elucidated through molecular docking and active site analysis.
期刊介绍:
The Journal of Natural Products invites and publishes papers that make substantial and scholarly contributions to the area of natural products research. Contributions may relate to the chemistry and/or biochemistry of naturally occurring compounds or the biology of living systems from which they are obtained.
Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.
When new compounds are reported, manuscripts describing their biological activity are much preferred.
Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.