基于玻璃体免疫介质谱的机器学习预测眼内疾病的方法。

IF 5 2区 医学 Q1 OPHTHALMOLOGY
Risa Sugawara, Yoshihiko Usui, Akira Saito, Naoya Nezu, Hiroyuki Komatsu, Kinya Tsubota, Masaki Asakage, Naoyuki Yamakawa, Yoshihiro Wakabayashi, Masahiro Sugimoto, Masahiko Kuroda, Hiroshi Goto
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引用次数: 0

摘要

目的:本研究旨在阐明应用于玻璃体免疫介质水平的机器学习算法是否能预测12种代表性眼内疾病的诊断,并确定驱动机器学习模型预测能力的免疫介质。方法:收集诊断为12种眼内疾病的522只眼的玻璃体标本,采用细胞头阵列技术检测28种免疫介质。通过采用五种机器学习算法确定每种免疫介质的重要性。分层k-fold交叉验证将数据集分为训练集和测试集。通过分析查全率、查全率、准确率、f值、受检者工作特征曲线下面积、查全率-查全率曲线下面积和特征重要性对算法进行评价。结果:在五种机器学习模型中,随机森林在多类别设置中的12种眼内疾病分类中获得了最高的准确性。玻璃体视网膜淋巴瘤、眼内炎、葡萄膜黑色素瘤、孔源性视网膜脱离和急性视网膜坏死的随机森林预测模型显示出较高的分类准确性、精密度和召回率。预测玻璃体视网膜淋巴瘤的前三位重要免疫介质是IL-10、颗粒酶A和IL-6;眼内炎为IL-6、G-CSF、IL-8;葡萄膜黑色素瘤为RANTES、IL-8和bFGF。结论:随机森林算法对玻璃体内28种免疫介质进行了有效分类,准确预测了12种代表性眼内疾病中玻璃体视网膜淋巴瘤、眼内炎和葡萄膜黑色素瘤的诊断。总之,本研究的结果增强了我们对潜在的新生物标志物的理解,这些生物标志物可能有助于阐明未来眼内疾病的病理生理学。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
An Approach to Predict Intraocular Diseases by Machine Learning Based on Vitreous Humor Immune Mediator Profile.

Purpose: This study aimed to elucidate whether machine learning algorithms applied to vitreous levels of immune mediators predict the diagnosis of 12 representative intraocular diseases, and identify immune mediators driving the predictive power of machine learning model.

Methods: Vitreous samples in 522 eyes diagnosed with 12 intraocular diseases were collected, and 28 immune mediators were measured using a cytometric bead array. The significance of each immune mediator was determined by employing five machine learning algorithms. Stratified k-fold cross-validation was performed to divide the dataset into training and test sets. The algorithms were assessed by analyzing precision, recall, accuracy, F-score, area under the receiver operating characteristics curve, area under the precision-recall curve, and feature importance.

Results: Of the five machine learning models, random forest attained the maximum accuracy in the classification of 12 intraocular diseases in a multi-class setting. The random forest prediction models for vitreoretinal lymphoma, endophthalmitis, uveal melanoma, rhegmatogenous retinal detachment, and acute retinal necrosis demonstrated superior classification accuracy, precision, and recall. The top three important immune mediators for predicting vitreoretinal lymphoma were IL-10, granzyme A, and IL-6; those for endophthalmitis were IL-6, G-CSF, and IL-8; and those for uveal melanoma were RANTES, IL-8 and bFGF.

Conclusions: The random forest algorithm effectively classified 28 immune mediators in the vitreous to accurately predict the diagnosis of vitreoretinal lymphoma, endophthalmitis, and uveal melanoma among 12 representative intraocular diseases. In summary, the results of this study enhance our understanding of potential new biomarkers that may contribute to elucidating the pathophysiology of intraocular diseases in the future.

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来源期刊
CiteScore
6.90
自引率
4.50%
发文量
339
审稿时长
1 months
期刊介绍: Investigative Ophthalmology & Visual Science (IOVS), published as ready online, is a peer-reviewed academic journal of the Association for Research in Vision and Ophthalmology (ARVO). IOVS features original research, mostly pertaining to clinical and laboratory ophthalmology and vision research in general.
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