ChatExosome:基于外泌体光谱深度学习的人工智能(AI)代理用于肝细胞癌(HCC)诊断

IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL
Zhejun Yang, Tongtong Tian*, Jilie Kong* and Hui Chen*, 
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引用次数: 0

摘要

大型语言模型(llm)在医学诊断领域具有重要的前景。肝细胞癌(HCC)的直接诊断仍存在许多挑战。α-胎蛋白(AFP)是肝癌常用的肿瘤标志物。然而,依赖AFP可能导致HCC的漏诊。我们开发了一个以llm为中心的人工智能(AI)代理,名为ChatExosome,它为临床光谱分析和诊断创造了一个交互式和便捷的系统。ChatExosome主要由两个部分组成:第一部分是对源自HCC的外泌体的拉曼指纹的深度学习。基于基于补丁的一维自关注机制和下采样,设计了特征融合变压器(FFT)来处理外显体的拉曼光谱。它对细胞来源的外泌体和165个临床样本的准确性分别达到95.8%和94.1%。第二个组件是基于LLM的交互式聊天代理。利用检索增强生成(retrieval-augmented generation, RAG)方法增强外泌体相关知识。总的来说,LLM是这个交互系统的核心,它能够识别用户的意图,并调用适当的插件来处理外泌体的拉曼数据。这是第一个专注于外泌体光谱和诊断的AI代理,增强了分类结果的可解释性,使医生能够利用前沿医学研究和人工智能技术来优化医疗决策过程,在智能诊断方面显示出巨大的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

ChatExosome: An Artificial Intelligence (AI) Agent Based on Deep Learning of Exosomes Spectroscopy for Hepatocellular Carcinoma (HCC) Diagnosis

ChatExosome: An Artificial Intelligence (AI) Agent Based on Deep Learning of Exosomes Spectroscopy for Hepatocellular Carcinoma (HCC) Diagnosis

Large language models (LLMs) hold significant promise in the field of medical diagnosis. There are still many challenges in the direct diagnosis of hepatocellular carcinoma (HCC). α-Fetoprotein (AFP) is a commonly used tumor marker for liver cancer. However, relying on AFP can result in missed diagnoses of HCC. We developed an artificial intelligence (AI) agent centered on LLMs, named ChatExosome, which created an interactive and convenient system for clinical spectroscopic analysis and diagnosis. ChatExosome consists of two main components: the first is the deep learning of the Raman fingerprinting of exosomes derived from HCC. Based on a patch-based 1D self-attention mechanism and downsampling, the feature fusion transformer (FFT) was designed to process the Raman spectra of exosomes. It achieved accuracies of 95.8% for cell-derived exosomes and 94.1% for 165 clinical samples, respectively. The second component is the interactive chat agent based on LLM. The retrieval-augmented generation (RAG) method was utilized to enhance the knowledge related to exosomes. Overall, LLM serves as the core of this interactive system, which is capable of identifying users’ intentions and invoking the appropriate plugins to process the Raman data of exosomes. This is the first AI agent focusing on exosome spectroscopy and diagnosis, enhancing the interpretability of classification results, enabling physicians to leverage cutting-edge medical research and artificial intelligence techniques to optimize medical decision-making processes, and it shows great potential in intelligent diagnosis.

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来源期刊
Analytical Chemistry
Analytical Chemistry 化学-分析化学
CiteScore
12.10
自引率
12.20%
发文量
1949
审稿时长
1.4 months
期刊介绍: Analytical Chemistry, a peer-reviewed research journal, focuses on disseminating new and original knowledge across all branches of analytical chemistry. Fundamental articles may explore general principles of chemical measurement science and need not directly address existing or potential analytical methodology. They can be entirely theoretical or report experimental results. Contributions may cover various phases of analytical operations, including sampling, bioanalysis, electrochemistry, mass spectrometry, microscale and nanoscale systems, environmental analysis, separations, spectroscopy, chemical reactions and selectivity, instrumentation, imaging, surface analysis, and data processing. Papers discussing known analytical methods should present a significant, original application of the method, a notable improvement, or results on an important analyte.
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