一种来自山地湿地的嗜中性、降解木聚糖的植物菌——石勒斯里亚。石勒斯里亚属的修正描述。

IF 2.2 4区 生物学 Q3 MICROBIOLOGY
Irina S Kulichevskaya, Anastasia A Ivanova, Daniil G Naumoff, Anna A Zlatogorskaya, Gennady S Kachmazov, Svetlana N Dedysh
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引用次数: 0

摘要

施勒斯纳氏菌属的需氧化有机营养化植物菌在淡水生态系统中广泛定植。该属唯一被描述的种是S. paludicola,它是一种从酸性泥炭沼泽中分离出来的中等嗜酸的椭球状细菌。在这里,我们描述了来自山地湿地的一种新的中性粒细胞成员,菌株T3-172T。该分离株具有无色素、不运动的球形细胞,在pH值为6.0-7.5、温度为15 - 37℃的培养基上生长,培养基中含有一些单糖和多糖。木聚糖是植物细胞壁的主要生物聚合物之一,在木聚糖上生长良好。菌株T3-172T的基因组大小为7.16 Mb,包含2组非连锁rRNA基因,93个tRNA基因,约5500个潜在的蛋白质编码基因。在后者中,GH5家族蛋白被认为是最可靠的劈裂木聚糖的候选蛋白。菌株T3-172T的16S rRNA基因序列与S. paludicola MPL7T的相似度为97.8%,两者基因组的平均核苷酸同源性为71.6%。因此,我们提出了一种新的石勒斯纳氏菌属,S. sphaerica sp. nov.,菌株T3-172T (=KCTC 102306T = VKM B-3856T)作为类型菌株。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Schlesneria sphaerica sp. nov., a neutrophilic, xylan-degrading planctomycete from a mountain wetland, and emended description of the genus Schlesneria.

Aerobic chemoorganotrophic planctomycetes of the genus Schlesneria colonize a wide spectrum of freshwater ecosystems. The only described species of this genus, S. paludicola, is represented by ellipsoid-shaped, moderately acidophilic bacteria isolated from acidic peat bogs. Here, we characterize a novel neutrophilic member of this genus from a mountain wetland, strain T3-172T. This isolate possesses unpigmented, non-motile, spherical cells, which grow on media containing some mono- and polysaccharides in the pH range of 6.0-7.5 and at temperatures between 15 and 37°C. Good growth is observed on xylan, one of the major plant cell wall biopolymers. The genome of strain T3-172T is 7.16 Mb in size and contains two unlinked sets of rRNA genes, 93 tRNA genes, and about 5500 potential protein-coding genes. Among the latter, the GH5 family protein is identified as the most reliable candidate for the cleavage of xylan. The 16S rRNA gene sequence of strain T3-172T displays 97.8% similarity to that of S. paludicola MPL7T, and the average nucleotide identity between the genomes of these planctomycetes is 71.6%. We, therefore, propose a novel species of the genus Schlesneria, S. sphaerica sp. nov., with strain T3-172T (=KCTC 102306T = VKM B-3856T) as the type strain.

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来源期刊
Fems Microbiology Letters
Fems Microbiology Letters 生物-微生物学
CiteScore
4.30
自引率
0.00%
发文量
112
审稿时长
1.9 months
期刊介绍: FEMS Microbiology Letters gives priority to concise papers that merit rapid publication by virtue of their originality, general interest and contribution to new developments in microbiology. All aspects of microbiology, including virology, are covered. 2019 Impact Factor: 1.987, Journal Citation Reports (Source Clarivate, 2020) Ranking: 98/135 (Microbiology) The journal is divided into eight Sections: Physiology and Biochemistry (including genetics, molecular biology and ‘omic’ studies) Food Microbiology (from food production and biotechnology to spoilage and food borne pathogens) Biotechnology and Synthetic Biology Pathogens and Pathogenicity (including medical, veterinary, plant and insect pathogens – particularly those relating to food security – with the exception of viruses) Environmental Microbiology (including ecophysiology, ecogenomics and meta-omic studies) Virology (viruses infecting any organism, including Bacteria and Archaea) Taxonomy and Systematics (for publication of novel taxa, taxonomic reclassifications and reviews of a taxonomic nature) Professional Development (including education, training, CPD, research assessment frameworks, research and publication metrics, best-practice, careers and history of microbiology) If you are unsure which Section is most appropriate for your manuscript, for example in the case of transdisciplinary studies, we recommend that you contact the Editor-In-Chief by email prior to submission. Our scope includes any type of microorganism - all members of the Bacteria and the Archaea and microbial members of the Eukarya (yeasts, filamentous fungi, microbial algae, protozoa, oomycetes, myxomycetes, etc.) as well as all viruses.
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