结合中红外和近红外的多模态光谱法用于区分革兰氏阳性和革兰氏阴性细菌

IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL
Analytical Chemistry Pub Date : 2024-11-19 Epub Date: 2024-11-04 DOI:10.1021/acs.analchem.4c03060
Thulya Chakkumpulakkal Puthan Veettil, Kamila Kochan, Galain C Williams, Kimberley Bourke, Xenia Kostoulias, Anton Y Peleg, Dena Lyras, Paul A De Bank, David Perez-Guaita, Bayden R Wood
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引用次数: 0

摘要

快速准确地识别致病细菌对于应对日益严重的抗生素耐药性、医院内感染和食品安全问题至关重要。本研究对两种振动光谱技术--衰减全反射傅立叶变换红外(ATR-FTIR)光谱和低成本微型近红外(NIR)光谱仪--进行了新颖而全面的比较,以区分使用相同培养基溶液生长的革兰氏阳性和革兰氏阴性细菌样本。这是首次报道应用近红外光谱仪区分革兰氏阳性和革兰氏阴性细菌,也是首次直接比较 ATR-FTIR 和近红外光谱仪对临床细菌分离物进行联合多模态分析。该研究采用了先进的数据融合和多元分析技术来对光谱进行分类,并促进近红外波段的分配。二维相关分析表明,在两种模式下确定的关键光谱标记之间存在很强的正相关性。利用对校准集和测试集进行 100 次重复随机抽样的方法,对偏最小二乘法和支持向量机判别分析模型进行了验证。模型表明,独立的 ATR-FTIR 方法和 ATR-FTIR/NIR 组合方法在区分两个细菌组时都达到了极高的分类准确率(>98%)。光谱中观察到的差异归因于革兰氏阳性和革兰氏阴性细菌不同的细胞壁组成。值得注意的是,低成本的近红外技术也表现出良好的性能,分类准确率超过 90%。研究结果凸显了这些快速、无创、经济高效的振动光谱技术,尤其是近红外方法在临床微生物学和食品安全监控中的床旁应用潜力。ATR-FTIR 和近红外数据的结合进一步提高了细菌鉴定的稳健性和可靠性,为在各种医疗保健和食品安全领域更广泛地采用这些先进的分析工具铺平了道路。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

A Multimodal Spectroscopic Approach Combining Mid-infrared and Near-infrared for Discriminating Gram-positive and Gram-negative Bacteria.

A Multimodal Spectroscopic Approach Combining Mid-infrared and Near-infrared for Discriminating Gram-positive and Gram-negative Bacteria.

The rapid and accurate identification of pathogenic bacteria is crucial for combating the growing threat of antibiotic resistance, nosocomial infections, and food safety concerns. This study presents a novel and comprehensive comparison of two vibrational spectroscopic techniques - attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy and a low-cost miniature near-infrared (NIR) spectrometer - for distinguishing Gram-positive and Gram-negative bacterial samples grown using the same stock media solution. This is the first report of NIR spectroscopy being applied to differentiate Gram-positive and Gram-negative bacteria, as well as the first direct comparison of ATR-FTIR and NIR for the combined multimodal analysis of clinical bacterial isolates. Using a data set of five Gram-positive and seven Gram-negative species and recording spectra in triplicate, the study employed advanced data fusion and multivariate analysis techniques to classify the spectra and facilitate NIR band assignment. 2D correlation analysis revealed strong positive correlations between key spectral markers identified in both modalities. Partial least-squares- and support vector machine discriminant analysis models were validated using a methodology based on 100 repeated random sampling of calibration and test sets. Models demonstrated that both the standalone ATR-FTIR and the combined ATR-FTIR/NIR approach achieved exceptional classification accuracy (>98%) in differentiating the two bacterial groups. Differences observed in the spectra were attributed to the distinct cell wall compositions of Gram-Positive and Gram-negative bacteria. Notably, the low-cost NIR technique also showed promising performance, with classification accuracy values above 90%. The findings highlight the potential of these rapid, noninvasive, and cost-effective vibrational spectroscopic techniques, particularly the NIR method, for point-of-care applications in clinical microbiology and food safety monitoring. The combination of ATR-FTIR and NIR data further enhances the robustness and reliability of bacterial identification, paving the way for broader adoption of these advanced analytical tools in various healthcare and food safety settings.

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来源期刊
Analytical Chemistry
Analytical Chemistry 化学-分析化学
CiteScore
12.10
自引率
12.20%
发文量
1949
审稿时长
1.4 months
期刊介绍: Analytical Chemistry, a peer-reviewed research journal, focuses on disseminating new and original knowledge across all branches of analytical chemistry. Fundamental articles may explore general principles of chemical measurement science and need not directly address existing or potential analytical methodology. They can be entirely theoretical or report experimental results. Contributions may cover various phases of analytical operations, including sampling, bioanalysis, electrochemistry, mass spectrometry, microscale and nanoscale systems, environmental analysis, separations, spectroscopy, chemical reactions and selectivity, instrumentation, imaging, surface analysis, and data processing. Papers discussing known analytical methods should present a significant, original application of the method, a notable improvement, or results on an important analyte.
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