Xiao-Xia Wang, Bei-Qian Deng, Zhi-Qiu Ouyang, Yang Yan, Jian-Ming Lv, Sheng-Ying Qin, Dan Hu, Guo-Dong Chen, Xin-Sheng Yao, Hao Gao
{"title":"天然原醌甲醚前体的靶向发现及其低聚物的绿色生成。","authors":"Xiao-Xia Wang, Bei-Qian Deng, Zhi-Qiu Ouyang, Yang Yan, Jian-Ming Lv, Sheng-Ying Qin, Dan Hu, Guo-Dong Chen, Xin-Sheng Yao, Hao Gao","doi":"10.1021/acs.jnatprod.4c00035","DOIUrl":null,"url":null,"abstract":"<p><p><i>ortho</i>-Quinone methides (<i>o</i>-QMs) are a class of highly reactive intermediates that serve as important nonisolable building blocks (NBBs) in organic synthesis and small-molecule library construction. Because of their instability and nonisolability, most reported <i>o</i>-QMs are generated through <i>in situ</i> chemical synthesis, and only a few natural <i>o</i>-QMs have been reported due to the lack of directed discovery strategies. Herein, a new natural <i>o</i>-QM precursor (trichophenol A, <b>2</b>) was identified from the fungal strain of <i>Trichoderma</i> sp. AT0167 through genome mining, which was generated by <i>trilA</i> (nonreducing polyketide synthase) and <i>trilB</i> (2-oxoglutarate dependent dioxygenase). Combinatorial biosynthesis via two other known NRPKS genes with <i>trilA</i> and <i>trilB</i> was performed, leading to the generation of five new trichophenol <i>o</i>-QM oligomers (trichophenols D-H, <b>5</b>-<b>9</b>). The strategy combining genome mining with combinatorial biosynthesis not only targetedly uncovered a new natural <i>o</i>-QM precursor but also produced various new molecules through oligomerization of the new <i>o</i>-QM and its designated <i>o</i>-QM acceptors without chemical synthesis and isolation of intermediates, which was named NBB genome mining-combinatorial biosynthesis strategy for <i>o</i>-QM molecule library construction. This study provides a new strategy for the targeted discovery of natural <i>o</i>-QMs and small-molecule library construction with natural <i>o</i>-QMs.</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":" ","pages":"2139-2147"},"PeriodicalIF":3.3000,"publicationDate":"2024-09-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Targeted Discovery of a Natural <i>ortho</i>-Quinone Methide Precursor and Green Generation of Its Oligomers.\",\"authors\":\"Xiao-Xia Wang, Bei-Qian Deng, Zhi-Qiu Ouyang, Yang Yan, Jian-Ming Lv, Sheng-Ying Qin, Dan Hu, Guo-Dong Chen, Xin-Sheng Yao, Hao Gao\",\"doi\":\"10.1021/acs.jnatprod.4c00035\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>ortho</i>-Quinone methides (<i>o</i>-QMs) are a class of highly reactive intermediates that serve as important nonisolable building blocks (NBBs) in organic synthesis and small-molecule library construction. Because of their instability and nonisolability, most reported <i>o</i>-QMs are generated through <i>in situ</i> chemical synthesis, and only a few natural <i>o</i>-QMs have been reported due to the lack of directed discovery strategies. Herein, a new natural <i>o</i>-QM precursor (trichophenol A, <b>2</b>) was identified from the fungal strain of <i>Trichoderma</i> sp. AT0167 through genome mining, which was generated by <i>trilA</i> (nonreducing polyketide synthase) and <i>trilB</i> (2-oxoglutarate dependent dioxygenase). Combinatorial biosynthesis via two other known NRPKS genes with <i>trilA</i> and <i>trilB</i> was performed, leading to the generation of five new trichophenol <i>o</i>-QM oligomers (trichophenols D-H, <b>5</b>-<b>9</b>). The strategy combining genome mining with combinatorial biosynthesis not only targetedly uncovered a new natural <i>o</i>-QM precursor but also produced various new molecules through oligomerization of the new <i>o</i>-QM and its designated <i>o</i>-QM acceptors without chemical synthesis and isolation of intermediates, which was named NBB genome mining-combinatorial biosynthesis strategy for <i>o</i>-QM molecule library construction. This study provides a new strategy for the targeted discovery of natural <i>o</i>-QMs and small-molecule library construction with natural <i>o</i>-QMs.</p>\",\"PeriodicalId\":47,\"journal\":{\"name\":\"Journal of Natural Products \",\"volume\":\" \",\"pages\":\"2139-2147\"},\"PeriodicalIF\":3.3000,\"publicationDate\":\"2024-09-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Natural Products \",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1021/acs.jnatprod.4c00035\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/8/28 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, MEDICINAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Natural Products ","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1021/acs.jnatprod.4c00035","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/8/28 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
Targeted Discovery of a Natural ortho-Quinone Methide Precursor and Green Generation of Its Oligomers.
ortho-Quinone methides (o-QMs) are a class of highly reactive intermediates that serve as important nonisolable building blocks (NBBs) in organic synthesis and small-molecule library construction. Because of their instability and nonisolability, most reported o-QMs are generated through in situ chemical synthesis, and only a few natural o-QMs have been reported due to the lack of directed discovery strategies. Herein, a new natural o-QM precursor (trichophenol A, 2) was identified from the fungal strain of Trichoderma sp. AT0167 through genome mining, which was generated by trilA (nonreducing polyketide synthase) and trilB (2-oxoglutarate dependent dioxygenase). Combinatorial biosynthesis via two other known NRPKS genes with trilA and trilB was performed, leading to the generation of five new trichophenol o-QM oligomers (trichophenols D-H, 5-9). The strategy combining genome mining with combinatorial biosynthesis not only targetedly uncovered a new natural o-QM precursor but also produced various new molecules through oligomerization of the new o-QM and its designated o-QM acceptors without chemical synthesis and isolation of intermediates, which was named NBB genome mining-combinatorial biosynthesis strategy for o-QM molecule library construction. This study provides a new strategy for the targeted discovery of natural o-QMs and small-molecule library construction with natural o-QMs.
期刊介绍:
The Journal of Natural Products invites and publishes papers that make substantial and scholarly contributions to the area of natural products research. Contributions may relate to the chemistry and/or biochemistry of naturally occurring compounds or the biology of living systems from which they are obtained.
Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.
When new compounds are reported, manuscripts describing their biological activity are much preferred.
Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.