用于识别颞叶癫痫发作起始区的功率和连接性 sEEG 生物标记比较研究。

IF 2.7 4区 医学 Q2 BIOCHEMICAL RESEARCH METHODS
Manel Vila-Vidal , Ferran Craven-Bartle Corominas , Matthieu Gilson , Riccardo Zucca , Alessandro Principe , Rodrigo Rocamora , Gustavo Deco , Adrià Tauste Campo
{"title":"用于识别颞叶癫痫发作起始区的功率和连接性 sEEG 生物标记比较研究。","authors":"Manel Vila-Vidal ,&nbsp;Ferran Craven-Bartle Corominas ,&nbsp;Matthieu Gilson ,&nbsp;Riccardo Zucca ,&nbsp;Alessandro Principe ,&nbsp;Rodrigo Rocamora ,&nbsp;Gustavo Deco ,&nbsp;Adrià Tauste Campo","doi":"10.1016/j.jneumeth.2024.110238","DOIUrl":null,"url":null,"abstract":"<div><h3>Background:</h3><p>Ictal stereo-encephalography (sEEG) biomarkers for seizure onset zone (SOZ) localization can be classified depending on whether they target abnormalities in signal power or functional connectivity between signals, and they may depend on the frequency band and time window at which they are estimated.</p></div><div><h3>New method:</h3><p>This work aimed to compare and optimize the performance of a power and a connectivity-based biomarker to identify SOZ contacts from ictal sEEG recordings. To do so, we used a previously introduced power-based measure, the normalized mean activation (nMA), which quantifies the ictal average power activation. Similarly, we defined the normalized mean strength (nMS), to quantify the ictal mean functional connectivity of every contact with the rest. The optimal frequency bands and time windows were selected based on optimizing AUC and F2-score.</p></div><div><h3>Results:</h3><p>The analysis was performed on a dataset of 67 seizures from 10 patients with pharmacoresistant temporal lobe epilepsy. Our results suggest that the power-based biomarker generally performs better for the detection of SOZ than the connectivity-based one. However, an equivalent performance level can be achieved when both biomarkers are independently optimized. Optimal performance was achieved in the beta and lower-gamma range for the power biomarker and in the lower- and higher-gamma range for connectivity, both using a 20 or 30 s period after seizure onset.</p></div><div><h3>Conclusions:</h3><p>The results of this study highlight the importance of this optimization step over frequency and time windows when comparing different SOZ discrimination biomarkers. This information should be considered when training SOZ classifiers on retrospective patients’ data for clinical applications.</p></div>","PeriodicalId":16415,"journal":{"name":"Journal of Neuroscience Methods","volume":"411 ","pages":"Article 110238"},"PeriodicalIF":2.7000,"publicationDate":"2024-08-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0165027024001833/pdfft?md5=59b47d5ea699b11845a3aae3c327c32f&pid=1-s2.0-S0165027024001833-main.pdf","citationCount":"0","resultStr":"{\"title\":\"A comparative study between a power and a connectivity sEEG biomarker for seizure-onset zone identification in temporal lobe epilepsy\",\"authors\":\"Manel Vila-Vidal ,&nbsp;Ferran Craven-Bartle Corominas ,&nbsp;Matthieu Gilson ,&nbsp;Riccardo Zucca ,&nbsp;Alessandro Principe ,&nbsp;Rodrigo Rocamora ,&nbsp;Gustavo Deco ,&nbsp;Adrià Tauste Campo\",\"doi\":\"10.1016/j.jneumeth.2024.110238\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Background:</h3><p>Ictal stereo-encephalography (sEEG) biomarkers for seizure onset zone (SOZ) localization can be classified depending on whether they target abnormalities in signal power or functional connectivity between signals, and they may depend on the frequency band and time window at which they are estimated.</p></div><div><h3>New method:</h3><p>This work aimed to compare and optimize the performance of a power and a connectivity-based biomarker to identify SOZ contacts from ictal sEEG recordings. To do so, we used a previously introduced power-based measure, the normalized mean activation (nMA), which quantifies the ictal average power activation. Similarly, we defined the normalized mean strength (nMS), to quantify the ictal mean functional connectivity of every contact with the rest. The optimal frequency bands and time windows were selected based on optimizing AUC and F2-score.</p></div><div><h3>Results:</h3><p>The analysis was performed on a dataset of 67 seizures from 10 patients with pharmacoresistant temporal lobe epilepsy. Our results suggest that the power-based biomarker generally performs better for the detection of SOZ than the connectivity-based one. However, an equivalent performance level can be achieved when both biomarkers are independently optimized. Optimal performance was achieved in the beta and lower-gamma range for the power biomarker and in the lower- and higher-gamma range for connectivity, both using a 20 or 30 s period after seizure onset.</p></div><div><h3>Conclusions:</h3><p>The results of this study highlight the importance of this optimization step over frequency and time windows when comparing different SOZ discrimination biomarkers. This information should be considered when training SOZ classifiers on retrospective patients’ data for clinical applications.</p></div>\",\"PeriodicalId\":16415,\"journal\":{\"name\":\"Journal of Neuroscience Methods\",\"volume\":\"411 \",\"pages\":\"Article 110238\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2024-08-19\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S0165027024001833/pdfft?md5=59b47d5ea699b11845a3aae3c327c32f&pid=1-s2.0-S0165027024001833-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Neuroscience Methods\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0165027024001833\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Neuroscience Methods","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0165027024001833","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0

摘要

背景:用于癫痫发作起始区(SOZ)定位的骨干立体脑电图(sEEG)生物标记物可根据其针对的是信号功率异常还是信号间的功能连接异常进行分类,而且它们可能取决于估计它们的频带和时间窗:这项工作旨在比较和优化基于功率和连接性的生物标志物的性能,以便从发作期 sEEG 记录中识别 SOZ 接触点。为此,我们使用了之前推出的一种基于功率的测量方法--归一化平均激活(nMA),它可以量化发作期的平均功率激活。同样,我们还定义了归一化平均强度(nMS),以量化发作期每个触点与其他触点的平均功能连通性。根据最优化的 AUC 和 F2-score,我们选择了最佳频带和时间窗:结果:我们对 10 名药物耐受性颞叶癫痫患者的 67 次发作数据集进行了分析。结果表明,基于功率的生物标记在检测 SOZ 方面的表现一般优于基于连接的生物标记。不过,如果对这两种生物标记进行独立优化,也能达到相同的性能水平。功率生物标记物在β和低γ范围内达到最佳性能,连接性生物标记物在低γ和高γ范围内达到最佳性能,两者均使用癫痫发作开始后的 20 或 30 秒时间:本研究的结果凸显了在比较不同的 SOZ 识别生物标记时,频率和时间窗优化步骤的重要性。在临床应用中使用患者的回顾性数据训练 SOZ 分类器时,应考虑这一信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A comparative study between a power and a connectivity sEEG biomarker for seizure-onset zone identification in temporal lobe epilepsy

Background:

Ictal stereo-encephalography (sEEG) biomarkers for seizure onset zone (SOZ) localization can be classified depending on whether they target abnormalities in signal power or functional connectivity between signals, and they may depend on the frequency band and time window at which they are estimated.

New method:

This work aimed to compare and optimize the performance of a power and a connectivity-based biomarker to identify SOZ contacts from ictal sEEG recordings. To do so, we used a previously introduced power-based measure, the normalized mean activation (nMA), which quantifies the ictal average power activation. Similarly, we defined the normalized mean strength (nMS), to quantify the ictal mean functional connectivity of every contact with the rest. The optimal frequency bands and time windows were selected based on optimizing AUC and F2-score.

Results:

The analysis was performed on a dataset of 67 seizures from 10 patients with pharmacoresistant temporal lobe epilepsy. Our results suggest that the power-based biomarker generally performs better for the detection of SOZ than the connectivity-based one. However, an equivalent performance level can be achieved when both biomarkers are independently optimized. Optimal performance was achieved in the beta and lower-gamma range for the power biomarker and in the lower- and higher-gamma range for connectivity, both using a 20 or 30 s period after seizure onset.

Conclusions:

The results of this study highlight the importance of this optimization step over frequency and time windows when comparing different SOZ discrimination biomarkers. This information should be considered when training SOZ classifiers on retrospective patients’ data for clinical applications.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Journal of Neuroscience Methods
Journal of Neuroscience Methods 医学-神经科学
CiteScore
7.10
自引率
3.30%
发文量
226
审稿时长
52 days
期刊介绍: The Journal of Neuroscience Methods publishes papers that describe new methods that are specifically for neuroscience research conducted in invertebrates, vertebrates or in man. Major methodological improvements or important refinements of established neuroscience methods are also considered for publication. The Journal''s Scope includes all aspects of contemporary neuroscience research, including anatomical, behavioural, biochemical, cellular, computational, molecular, invasive and non-invasive imaging, optogenetic, and physiological research investigations.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信