通过基因组挖掘、异源表达和 OSMAC 策略发现具有植物毒性的混合分子。

IF 6.2 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY
Journal of Agricultural and Food Chemistry Pub Date : 2024-08-21 Epub Date: 2024-08-06 DOI:10.1021/acs.jafc.4c04244
Yubo Lu, Yanpeng Li, Min Dou, Dong Liu, Wenhan Lin, Aili Fan
{"title":"通过基因组挖掘、异源表达和 OSMAC 策略发现具有植物毒性的混合分子。","authors":"Yubo Lu, Yanpeng Li, Min Dou, Dong Liu, Wenhan Lin, Aili Fan","doi":"10.1021/acs.jafc.4c04244","DOIUrl":null,"url":null,"abstract":"<p><p>Genome mining in association with the OSMAC (one strain, many compounds) approach provides a feasible strategy to extend the chemical diversity and novelty of natural products. In this study, we identified the biosynthetic gene cluster (BGC) of restricticin, a promising antifungal agent featuring a reactive primary amine, from the fungus <i>Aspergillus sclerotiorum</i> LZDX-33-4 by genome mining. Combining heterologous expression and the OSMAC strategy resulted in the production of a new hybrid product (<b>1</b>), along with <i>N</i>-acetyl-restricticin (<b>2</b>) and restricticinol (<b>3</b>). The structure of <b>1</b> was determined by spectroscopic data, including optical rotation and electronic circular dichroism (ECD) calculations, for configurational assignment. Compound <b>1</b> represents a fusion of restricticin and phytotoxic cichorin. The biosynthetic pathway of <b>1</b> was proposed, in which the condensation of a primary amine of restricticin with a precursor of cichorine was postulated. Compound <b>1</b> at 5 mM concentration inhibited the growth of the shoots and roots of <i>Lolium perenne</i>, <i>Festuca arundinacea</i>, and <i>Lactuca sativa</i> with inhibitory rates of 71.3 and 88.7% for <i>L. perenne</i>, 79.4 and 73.0% for <i>F. arundinacea</i>, and 58.2 and 52.9% for <i>L. sativa.</i> In addition, compound <b>1</b> at 25 μg/mL showed moderate antifungal activity against <i>Fusarium fujikuroi</i> and <i>Trichoderma harzianum</i> with inhibition rates of 22.6 and 31.6%, respectively. These results suggest that heterologous expression in conjunction with the OSMAC approach provides a promising strategy to extend the metabolite novelty due to the incorporation of endogenous metabolites from the host strain with exogenous compounds, leading to the production of more complex compounds and the acquisition of new physiological functions.</p>","PeriodicalId":41,"journal":{"name":"Journal of Agricultural and Food Chemistry","volume":" ","pages":"18520-18527"},"PeriodicalIF":6.2000,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Discovery of a Hybrid Molecule with Phytotoxic Activity by Genome Mining, Heterologous Expression, and OSMAC Strategy.\",\"authors\":\"Yubo Lu, Yanpeng Li, Min Dou, Dong Liu, Wenhan Lin, Aili Fan\",\"doi\":\"10.1021/acs.jafc.4c04244\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Genome mining in association with the OSMAC (one strain, many compounds) approach provides a feasible strategy to extend the chemical diversity and novelty of natural products. In this study, we identified the biosynthetic gene cluster (BGC) of restricticin, a promising antifungal agent featuring a reactive primary amine, from the fungus <i>Aspergillus sclerotiorum</i> LZDX-33-4 by genome mining. Combining heterologous expression and the OSMAC strategy resulted in the production of a new hybrid product (<b>1</b>), along with <i>N</i>-acetyl-restricticin (<b>2</b>) and restricticinol (<b>3</b>). The structure of <b>1</b> was determined by spectroscopic data, including optical rotation and electronic circular dichroism (ECD) calculations, for configurational assignment. Compound <b>1</b> represents a fusion of restricticin and phytotoxic cichorin. The biosynthetic pathway of <b>1</b> was proposed, in which the condensation of a primary amine of restricticin with a precursor of cichorine was postulated. Compound <b>1</b> at 5 mM concentration inhibited the growth of the shoots and roots of <i>Lolium perenne</i>, <i>Festuca arundinacea</i>, and <i>Lactuca sativa</i> with inhibitory rates of 71.3 and 88.7% for <i>L. perenne</i>, 79.4 and 73.0% for <i>F. arundinacea</i>, and 58.2 and 52.9% for <i>L. sativa.</i> In addition, compound <b>1</b> at 25 μg/mL showed moderate antifungal activity against <i>Fusarium fujikuroi</i> and <i>Trichoderma harzianum</i> with inhibition rates of 22.6 and 31.6%, respectively. These results suggest that heterologous expression in conjunction with the OSMAC approach provides a promising strategy to extend the metabolite novelty due to the incorporation of endogenous metabolites from the host strain with exogenous compounds, leading to the production of more complex compounds and the acquisition of new physiological functions.</p>\",\"PeriodicalId\":41,\"journal\":{\"name\":\"Journal of Agricultural and Food Chemistry\",\"volume\":\" \",\"pages\":\"18520-18527\"},\"PeriodicalIF\":6.2000,\"publicationDate\":\"2024-08-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Agricultural and Food Chemistry\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://doi.org/10.1021/acs.jafc.4c04244\",\"RegionNum\":1,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/8/6 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q1\",\"JCRName\":\"AGRICULTURE, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Agricultural and Food Chemistry","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.1021/acs.jafc.4c04244","RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/8/6 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"AGRICULTURE, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

摘要

基因组挖掘与 OSMAC(一株菌株,多种化合物)方法相结合,为扩展天然产品的化学多样性和新颖性提供了一种可行的策略。在这项研究中,我们通过基因组挖掘从真菌硬曲霉 LZDX-33-4 中鉴定出了限制素的生物合成基因簇(BGC),限制素是一种具有活性伯胺的有前途的抗真菌剂。结合异源表达和 OSMAC 策略,生产出了一种新的杂交产物(1)以及 N-乙酰基-restricticin(2)和 restricticinol(3)。1 的结构是通过光谱数据确定的,包括光学旋转和电子圆二色性(ECD)计算,以进行构型分配。化合物 1 是拮抗素和植物毒素 cichorin 的融合物。研究人员提出了化合物 1 的生物合成途径,其中推测 restricticin 的伯胺与 cichorine 的前体缩合。浓度为 5 mM 的化合物 1 可抑制欧洲旱金莲(Lolium perenne)、旱金莲(Festuca arundinacea)和荠菜(Lactuca sativa)的芽和根的生长,对欧洲旱金莲的抑制率分别为 71.3% 和 88.7%,对旱金莲的抑制率分别为 79.4% 和 73.0%,对荠菜的抑制率分别为 58.2% 和 52.9%。此外,浓度为 25 μg/mL 的化合物 1 对 Fusarium fujikuroi 和 Trichoderma harzianum 具有中等抗真菌活性,抑制率分别为 22.6% 和 31.6%。这些结果表明,异源表达结合 OSMAC 方法提供了一种很有前景的策略,由于宿主菌株的内源代谢物与外源化合物结合,从而产生了更复杂的化合物,并获得了新的生理功能,从而扩大了代谢物的新颖性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Discovery of a Hybrid Molecule with Phytotoxic Activity by Genome Mining, Heterologous Expression, and OSMAC Strategy.

Discovery of a Hybrid Molecule with Phytotoxic Activity by Genome Mining, Heterologous Expression, and OSMAC Strategy.

Genome mining in association with the OSMAC (one strain, many compounds) approach provides a feasible strategy to extend the chemical diversity and novelty of natural products. In this study, we identified the biosynthetic gene cluster (BGC) of restricticin, a promising antifungal agent featuring a reactive primary amine, from the fungus Aspergillus sclerotiorum LZDX-33-4 by genome mining. Combining heterologous expression and the OSMAC strategy resulted in the production of a new hybrid product (1), along with N-acetyl-restricticin (2) and restricticinol (3). The structure of 1 was determined by spectroscopic data, including optical rotation and electronic circular dichroism (ECD) calculations, for configurational assignment. Compound 1 represents a fusion of restricticin and phytotoxic cichorin. The biosynthetic pathway of 1 was proposed, in which the condensation of a primary amine of restricticin with a precursor of cichorine was postulated. Compound 1 at 5 mM concentration inhibited the growth of the shoots and roots of Lolium perenne, Festuca arundinacea, and Lactuca sativa with inhibitory rates of 71.3 and 88.7% for L. perenne, 79.4 and 73.0% for F. arundinacea, and 58.2 and 52.9% for L. sativa. In addition, compound 1 at 25 μg/mL showed moderate antifungal activity against Fusarium fujikuroi and Trichoderma harzianum with inhibition rates of 22.6 and 31.6%, respectively. These results suggest that heterologous expression in conjunction with the OSMAC approach provides a promising strategy to extend the metabolite novelty due to the incorporation of endogenous metabolites from the host strain with exogenous compounds, leading to the production of more complex compounds and the acquisition of new physiological functions.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Journal of Agricultural and Food Chemistry
Journal of Agricultural and Food Chemistry 农林科学-农业综合
CiteScore
9.90
自引率
8.20%
发文量
1375
审稿时长
2.3 months
期刊介绍: The Journal of Agricultural and Food Chemistry publishes high-quality, cutting edge original research representing complete studies and research advances dealing with the chemistry and biochemistry of agriculture and food. The Journal also encourages papers with chemistry and/or biochemistry as a major component combined with biological/sensory/nutritional/toxicological evaluation related to agriculture and/or food.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信