Yubo Lu, Yanpeng Li, Min Dou, Dong Liu, Wenhan Lin, Aili Fan
{"title":"通过基因组挖掘、异源表达和 OSMAC 策略发现具有植物毒性的混合分子。","authors":"Yubo Lu, Yanpeng Li, Min Dou, Dong Liu, Wenhan Lin, Aili Fan","doi":"10.1021/acs.jafc.4c04244","DOIUrl":null,"url":null,"abstract":"<p><p>Genome mining in association with the OSMAC (one strain, many compounds) approach provides a feasible strategy to extend the chemical diversity and novelty of natural products. In this study, we identified the biosynthetic gene cluster (BGC) of restricticin, a promising antifungal agent featuring a reactive primary amine, from the fungus <i>Aspergillus sclerotiorum</i> LZDX-33-4 by genome mining. Combining heterologous expression and the OSMAC strategy resulted in the production of a new hybrid product (<b>1</b>), along with <i>N</i>-acetyl-restricticin (<b>2</b>) and restricticinol (<b>3</b>). The structure of <b>1</b> was determined by spectroscopic data, including optical rotation and electronic circular dichroism (ECD) calculations, for configurational assignment. Compound <b>1</b> represents a fusion of restricticin and phytotoxic cichorin. The biosynthetic pathway of <b>1</b> was proposed, in which the condensation of a primary amine of restricticin with a precursor of cichorine was postulated. Compound <b>1</b> at 5 mM concentration inhibited the growth of the shoots and roots of <i>Lolium perenne</i>, <i>Festuca arundinacea</i>, and <i>Lactuca sativa</i> with inhibitory rates of 71.3 and 88.7% for <i>L. perenne</i>, 79.4 and 73.0% for <i>F. arundinacea</i>, and 58.2 and 52.9% for <i>L. sativa.</i> In addition, compound <b>1</b> at 25 μg/mL showed moderate antifungal activity against <i>Fusarium fujikuroi</i> and <i>Trichoderma harzianum</i> with inhibition rates of 22.6 and 31.6%, respectively. These results suggest that heterologous expression in conjunction with the OSMAC approach provides a promising strategy to extend the metabolite novelty due to the incorporation of endogenous metabolites from the host strain with exogenous compounds, leading to the production of more complex compounds and the acquisition of new physiological functions.</p>","PeriodicalId":41,"journal":{"name":"Journal of Agricultural and Food Chemistry","volume":" ","pages":"18520-18527"},"PeriodicalIF":6.2000,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Discovery of a Hybrid Molecule with Phytotoxic Activity by Genome Mining, Heterologous Expression, and OSMAC Strategy.\",\"authors\":\"Yubo Lu, Yanpeng Li, Min Dou, Dong Liu, Wenhan Lin, Aili Fan\",\"doi\":\"10.1021/acs.jafc.4c04244\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Genome mining in association with the OSMAC (one strain, many compounds) approach provides a feasible strategy to extend the chemical diversity and novelty of natural products. In this study, we identified the biosynthetic gene cluster (BGC) of restricticin, a promising antifungal agent featuring a reactive primary amine, from the fungus <i>Aspergillus sclerotiorum</i> LZDX-33-4 by genome mining. Combining heterologous expression and the OSMAC strategy resulted in the production of a new hybrid product (<b>1</b>), along with <i>N</i>-acetyl-restricticin (<b>2</b>) and restricticinol (<b>3</b>). The structure of <b>1</b> was determined by spectroscopic data, including optical rotation and electronic circular dichroism (ECD) calculations, for configurational assignment. Compound <b>1</b> represents a fusion of restricticin and phytotoxic cichorin. The biosynthetic pathway of <b>1</b> was proposed, in which the condensation of a primary amine of restricticin with a precursor of cichorine was postulated. Compound <b>1</b> at 5 mM concentration inhibited the growth of the shoots and roots of <i>Lolium perenne</i>, <i>Festuca arundinacea</i>, and <i>Lactuca sativa</i> with inhibitory rates of 71.3 and 88.7% for <i>L. perenne</i>, 79.4 and 73.0% for <i>F. arundinacea</i>, and 58.2 and 52.9% for <i>L. sativa.</i> In addition, compound <b>1</b> at 25 μg/mL showed moderate antifungal activity against <i>Fusarium fujikuroi</i> and <i>Trichoderma harzianum</i> with inhibition rates of 22.6 and 31.6%, respectively. These results suggest that heterologous expression in conjunction with the OSMAC approach provides a promising strategy to extend the metabolite novelty due to the incorporation of endogenous metabolites from the host strain with exogenous compounds, leading to the production of more complex compounds and the acquisition of new physiological functions.</p>\",\"PeriodicalId\":41,\"journal\":{\"name\":\"Journal of Agricultural and Food Chemistry\",\"volume\":\" \",\"pages\":\"18520-18527\"},\"PeriodicalIF\":6.2000,\"publicationDate\":\"2024-08-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Agricultural and Food Chemistry\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://doi.org/10.1021/acs.jafc.4c04244\",\"RegionNum\":1,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/8/6 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q1\",\"JCRName\":\"AGRICULTURE, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Agricultural and Food Chemistry","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.1021/acs.jafc.4c04244","RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/8/6 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"AGRICULTURE, MULTIDISCIPLINARY","Score":null,"Total":0}
Discovery of a Hybrid Molecule with Phytotoxic Activity by Genome Mining, Heterologous Expression, and OSMAC Strategy.
Genome mining in association with the OSMAC (one strain, many compounds) approach provides a feasible strategy to extend the chemical diversity and novelty of natural products. In this study, we identified the biosynthetic gene cluster (BGC) of restricticin, a promising antifungal agent featuring a reactive primary amine, from the fungus Aspergillus sclerotiorum LZDX-33-4 by genome mining. Combining heterologous expression and the OSMAC strategy resulted in the production of a new hybrid product (1), along with N-acetyl-restricticin (2) and restricticinol (3). The structure of 1 was determined by spectroscopic data, including optical rotation and electronic circular dichroism (ECD) calculations, for configurational assignment. Compound 1 represents a fusion of restricticin and phytotoxic cichorin. The biosynthetic pathway of 1 was proposed, in which the condensation of a primary amine of restricticin with a precursor of cichorine was postulated. Compound 1 at 5 mM concentration inhibited the growth of the shoots and roots of Lolium perenne, Festuca arundinacea, and Lactuca sativa with inhibitory rates of 71.3 and 88.7% for L. perenne, 79.4 and 73.0% for F. arundinacea, and 58.2 and 52.9% for L. sativa. In addition, compound 1 at 25 μg/mL showed moderate antifungal activity against Fusarium fujikuroi and Trichoderma harzianum with inhibition rates of 22.6 and 31.6%, respectively. These results suggest that heterologous expression in conjunction with the OSMAC approach provides a promising strategy to extend the metabolite novelty due to the incorporation of endogenous metabolites from the host strain with exogenous compounds, leading to the production of more complex compounds and the acquisition of new physiological functions.
期刊介绍:
The Journal of Agricultural and Food Chemistry publishes high-quality, cutting edge original research representing complete studies and research advances dealing with the chemistry and biochemistry of agriculture and food. The Journal also encourages papers with chemistry and/or biochemistry as a major component combined with biological/sensory/nutritional/toxicological evaluation related to agriculture and/or food.