副萘内酯的分离:通过苯齐酸重排而非 Favorskii 重排获得萘内酯的合理生物合成解释

IF 3.6 2区 生物学 Q2 CHEMISTRY, MEDICINAL
Yuki Oinuma, Ryuhi Kanehara, Hayato Maeda, Toshio Nishikawa, Katsuhiro Konno, Kazuaki Tanaka and Masaru Hashimoto*, 
{"title":"副萘内酯的分离:通过苯齐酸重排而非 Favorskii 重排获得萘内酯的合理生物合成解释","authors":"Yuki Oinuma,&nbsp;Ryuhi Kanehara,&nbsp;Hayato Maeda,&nbsp;Toshio Nishikawa,&nbsp;Katsuhiro Konno,&nbsp;Kazuaki Tanaka and Masaru Hashimoto*,&nbsp;","doi":"10.1021/acs.jnatprod.4c00104","DOIUrl":null,"url":null,"abstract":"<p >Paraphaeoketones A–C (<b>1</b>–<b>3</b>) were isolated from the culture broth of <i>Paraphaeosphaeria</i> sp. KT4192. Their structures and relative configurations were determined using spectroscopic analysis and verified through density functional theory (DFT)-based chemical shift calculations. The absolute configurations of these compounds were determined by comparing the experimental electronic circular dichroism (ECD) spectra with those based on DFT calculations. We also propose a plausible biosynthetic route to <b>1</b>–<b>3</b>. While our prior studies on the isolation and structural elucidation of paraphaeolactones (e.g., <b>4</b>) led us to suggest a Favorskii rearrangement for their biosynthesis, the isolation of <b>2</b> prompted the proposal of an alternative biosynthesis for <b>4</b>, featuring a benzilic acid rearrangement of <b>2</b>. Moreover, an in vitro conversion of <b>2</b> into <b>4</b> was achieved successfully, suggesting that a biosynthetic pathway for paraphaeolactones involving a benzilic acid rearrangement is more plausible than the previously presumed Favorskii rearrangement pathway. Arguments based on DFT calculations for these pathways are also described.</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":"87 4","pages":"1159–1170"},"PeriodicalIF":3.6000,"publicationDate":"2024-03-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Isolation of Paraphaeoketones: A Plausible Biosynthetic Explanation for Paraphaeolactones via a Benzilic Acid Rearrangement Rather than a Favorskii Rearrangement\",\"authors\":\"Yuki Oinuma,&nbsp;Ryuhi Kanehara,&nbsp;Hayato Maeda,&nbsp;Toshio Nishikawa,&nbsp;Katsuhiro Konno,&nbsp;Kazuaki Tanaka and Masaru Hashimoto*,&nbsp;\",\"doi\":\"10.1021/acs.jnatprod.4c00104\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p >Paraphaeoketones A–C (<b>1</b>–<b>3</b>) were isolated from the culture broth of <i>Paraphaeosphaeria</i> sp. KT4192. Their structures and relative configurations were determined using spectroscopic analysis and verified through density functional theory (DFT)-based chemical shift calculations. The absolute configurations of these compounds were determined by comparing the experimental electronic circular dichroism (ECD) spectra with those based on DFT calculations. We also propose a plausible biosynthetic route to <b>1</b>–<b>3</b>. While our prior studies on the isolation and structural elucidation of paraphaeolactones (e.g., <b>4</b>) led us to suggest a Favorskii rearrangement for their biosynthesis, the isolation of <b>2</b> prompted the proposal of an alternative biosynthesis for <b>4</b>, featuring a benzilic acid rearrangement of <b>2</b>. Moreover, an in vitro conversion of <b>2</b> into <b>4</b> was achieved successfully, suggesting that a biosynthetic pathway for paraphaeolactones involving a benzilic acid rearrangement is more plausible than the previously presumed Favorskii rearrangement pathway. Arguments based on DFT calculations for these pathways are also described.</p>\",\"PeriodicalId\":47,\"journal\":{\"name\":\"Journal of Natural Products \",\"volume\":\"87 4\",\"pages\":\"1159–1170\"},\"PeriodicalIF\":3.6000,\"publicationDate\":\"2024-03-29\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Natural Products \",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://pubs.acs.org/doi/10.1021/acs.jnatprod.4c00104\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, MEDICINAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Natural Products ","FirstCategoryId":"99","ListUrlMain":"https://pubs.acs.org/doi/10.1021/acs.jnatprod.4c00104","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
引用次数: 0

摘要

从 Paraphaeosphaeria sp. KT4192 的培养液中分离出了副萘酮 A-C(1-3)。通过光谱分析确定了这些化合物的结构和相对构型,并通过基于密度泛函理论(DFT)的化学位移计算进行了验证。通过比较实验电子圆二色性(ECD)光谱和基于 DFT 计算的光谱,确定了这些化合物的绝对构型。我们还提出了 1-3 的合理生物合成路线。虽然我们之前对萘内酯的分离和结构阐释研究(例如此外,我们还成功地在体外将 2 转化为 4,这表明与之前推测的 Favorskii 重排途径相比,涉及苯二甲酸重排的对位萘内酯的生物合成途径更为可信。此外,还介绍了基于 DFT 计算对这些途径的论证。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Isolation of Paraphaeoketones: A Plausible Biosynthetic Explanation for Paraphaeolactones via a Benzilic Acid Rearrangement Rather than a Favorskii Rearrangement

Isolation of Paraphaeoketones: A Plausible Biosynthetic Explanation for Paraphaeolactones via a Benzilic Acid Rearrangement Rather than a Favorskii Rearrangement

Isolation of Paraphaeoketones: A Plausible Biosynthetic Explanation for Paraphaeolactones via a Benzilic Acid Rearrangement Rather than a Favorskii Rearrangement

Paraphaeoketones A–C (13) were isolated from the culture broth of Paraphaeosphaeria sp. KT4192. Their structures and relative configurations were determined using spectroscopic analysis and verified through density functional theory (DFT)-based chemical shift calculations. The absolute configurations of these compounds were determined by comparing the experimental electronic circular dichroism (ECD) spectra with those based on DFT calculations. We also propose a plausible biosynthetic route to 13. While our prior studies on the isolation and structural elucidation of paraphaeolactones (e.g., 4) led us to suggest a Favorskii rearrangement for their biosynthesis, the isolation of 2 prompted the proposal of an alternative biosynthesis for 4, featuring a benzilic acid rearrangement of 2. Moreover, an in vitro conversion of 2 into 4 was achieved successfully, suggesting that a biosynthetic pathway for paraphaeolactones involving a benzilic acid rearrangement is more plausible than the previously presumed Favorskii rearrangement pathway. Arguments based on DFT calculations for these pathways are also described.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
9.10
自引率
5.90%
发文量
294
审稿时长
2.3 months
期刊介绍: The Journal of Natural Products invites and publishes papers that make substantial and scholarly contributions to the area of natural products research. Contributions may relate to the chemistry and/or biochemistry of naturally occurring compounds or the biology of living systems from which they are obtained. Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin. When new compounds are reported, manuscripts describing their biological activity are much preferred. Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信