{"title":"副萘内酯的分离:通过苯齐酸重排而非 Favorskii 重排获得萘内酯的合理生物合成解释","authors":"Yuki Oinuma, Ryuhi Kanehara, Hayato Maeda, Toshio Nishikawa, Katsuhiro Konno, Kazuaki Tanaka and Masaru Hashimoto*, ","doi":"10.1021/acs.jnatprod.4c00104","DOIUrl":null,"url":null,"abstract":"<p >Paraphaeoketones A–C (<b>1</b>–<b>3</b>) were isolated from the culture broth of <i>Paraphaeosphaeria</i> sp. KT4192. Their structures and relative configurations were determined using spectroscopic analysis and verified through density functional theory (DFT)-based chemical shift calculations. The absolute configurations of these compounds were determined by comparing the experimental electronic circular dichroism (ECD) spectra with those based on DFT calculations. We also propose a plausible biosynthetic route to <b>1</b>–<b>3</b>. While our prior studies on the isolation and structural elucidation of paraphaeolactones (e.g., <b>4</b>) led us to suggest a Favorskii rearrangement for their biosynthesis, the isolation of <b>2</b> prompted the proposal of an alternative biosynthesis for <b>4</b>, featuring a benzilic acid rearrangement of <b>2</b>. Moreover, an in vitro conversion of <b>2</b> into <b>4</b> was achieved successfully, suggesting that a biosynthetic pathway for paraphaeolactones involving a benzilic acid rearrangement is more plausible than the previously presumed Favorskii rearrangement pathway. Arguments based on DFT calculations for these pathways are also described.</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":"87 4","pages":"1159–1170"},"PeriodicalIF":3.6000,"publicationDate":"2024-03-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Isolation of Paraphaeoketones: A Plausible Biosynthetic Explanation for Paraphaeolactones via a Benzilic Acid Rearrangement Rather than a Favorskii Rearrangement\",\"authors\":\"Yuki Oinuma, Ryuhi Kanehara, Hayato Maeda, Toshio Nishikawa, Katsuhiro Konno, Kazuaki Tanaka and Masaru Hashimoto*, \",\"doi\":\"10.1021/acs.jnatprod.4c00104\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p >Paraphaeoketones A–C (<b>1</b>–<b>3</b>) were isolated from the culture broth of <i>Paraphaeosphaeria</i> sp. KT4192. Their structures and relative configurations were determined using spectroscopic analysis and verified through density functional theory (DFT)-based chemical shift calculations. The absolute configurations of these compounds were determined by comparing the experimental electronic circular dichroism (ECD) spectra with those based on DFT calculations. We also propose a plausible biosynthetic route to <b>1</b>–<b>3</b>. While our prior studies on the isolation and structural elucidation of paraphaeolactones (e.g., <b>4</b>) led us to suggest a Favorskii rearrangement for their biosynthesis, the isolation of <b>2</b> prompted the proposal of an alternative biosynthesis for <b>4</b>, featuring a benzilic acid rearrangement of <b>2</b>. Moreover, an in vitro conversion of <b>2</b> into <b>4</b> was achieved successfully, suggesting that a biosynthetic pathway for paraphaeolactones involving a benzilic acid rearrangement is more plausible than the previously presumed Favorskii rearrangement pathway. Arguments based on DFT calculations for these pathways are also described.</p>\",\"PeriodicalId\":47,\"journal\":{\"name\":\"Journal of Natural Products \",\"volume\":\"87 4\",\"pages\":\"1159–1170\"},\"PeriodicalIF\":3.6000,\"publicationDate\":\"2024-03-29\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Natural Products \",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://pubs.acs.org/doi/10.1021/acs.jnatprod.4c00104\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, MEDICINAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Natural Products ","FirstCategoryId":"99","ListUrlMain":"https://pubs.acs.org/doi/10.1021/acs.jnatprod.4c00104","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
Isolation of Paraphaeoketones: A Plausible Biosynthetic Explanation for Paraphaeolactones via a Benzilic Acid Rearrangement Rather than a Favorskii Rearrangement
Paraphaeoketones A–C (1–3) were isolated from the culture broth of Paraphaeosphaeria sp. KT4192. Their structures and relative configurations were determined using spectroscopic analysis and verified through density functional theory (DFT)-based chemical shift calculations. The absolute configurations of these compounds were determined by comparing the experimental electronic circular dichroism (ECD) spectra with those based on DFT calculations. We also propose a plausible biosynthetic route to 1–3. While our prior studies on the isolation and structural elucidation of paraphaeolactones (e.g., 4) led us to suggest a Favorskii rearrangement for their biosynthesis, the isolation of 2 prompted the proposal of an alternative biosynthesis for 4, featuring a benzilic acid rearrangement of 2. Moreover, an in vitro conversion of 2 into 4 was achieved successfully, suggesting that a biosynthetic pathway for paraphaeolactones involving a benzilic acid rearrangement is more plausible than the previously presumed Favorskii rearrangement pathway. Arguments based on DFT calculations for these pathways are also described.
期刊介绍:
The Journal of Natural Products invites and publishes papers that make substantial and scholarly contributions to the area of natural products research. Contributions may relate to the chemistry and/or biochemistry of naturally occurring compounds or the biology of living systems from which they are obtained.
Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.
When new compounds are reported, manuscripts describing their biological activity are much preferred.
Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.