Brain subnetworks most sensitive to alterations of functional connectivity in Schizophrenia: a data-driven approach.

IF 2.5 4区 医学 Q2 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Frontiers in Neuroinformatics Pub Date : 2023-05-18 eCollection Date: 2023-01-01 DOI:10.3389/fninf.2023.1175886
Farzaneh Keyvanfard, Alireza Rahimi Nasab, Abbas Nasiraei-Moghaddam
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引用次数: 0

Abstract

Functional connectivity (FC) of the brain changes in various brain disorders. Its complexity, however, makes it difficult to obtain a systematic understanding of these alterations, especially when they are found individually and through hypothesis-based methods. It would be easier if the variety of brain connectivity alterations is extracted through data-driven approaches and expressed as variation modules (subnetworks). In the present study, we modified a blind approach to determine inter-group brain variations at the network level and applied it specifically to schizophrenia (SZ) disorder. The analysis is based on the application of independent component analysis (ICA) over the subject's dimension of the FC matrices, obtained from resting-state functional magnetic resonance imaging (rs-fMRI). The dataset included 27 SZ people and 27 completely matched healthy controls (HC). This hypothesis-free approach led to the finding of three brain subnetworks significantly discriminating SZ from HC. The area associated with these subnetworks mostly covers regions in visual, ventral attention, and somatomotor areas, which are in line with previous studies. Moreover, from the graph perspective, significant differences were observed between SZ and HC for these subnetworks, while there was no significant difference when the same parameters (path length, network strength, global/local efficiency, and clustering coefficient) across the same limited data were calculated for the whole brain network. The increased sensitivity of those subnetworks to SZ-induced alterations of connectivity suggested whether an individual scoring method based on their connectivity values can be applied to classify subjects. A simple scoring classifier was then suggested based on two of these subnetworks and resulted in acceptable sensitivity and specificity with an area under the ROC curve of 77.5%. The third subnetwork was found to be a less specific building block (module) for describing SZ alterations. It projected a wider range of inter-individual variations and, therefore, had a lower chance to be considered as a SZ biomarker. These findings confirmed that investigating brain variations from a modular viewpoint can help to find subnetworks that are more sensitive to SZ-induced alterations. Altogether, our study results illustrated the developed method's ability to systematically find brain alterations caused by SZ disorder from a network perspective.

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对精神分裂症功能连接改变最敏感的大脑亚网络:一种数据驱动方法。
大脑功能连接(FC)在各种脑部疾病中都会发生变化。然而,由于其复杂性,很难系统地了解这些改变,尤其是当它们是通过基于假设的方法单独发现时。如果能通过数据驱动的方法提取大脑连接性改变的多样性,并将其表达为变异模块(子网络),则会更加容易。在本研究中,我们修改了一种在网络水平上确定组间大脑变异的盲法,并将其专门应用于精神分裂症(SZ)障碍。该分析基于对静息态功能磁共振成像(rs-fMRI)获得的FC矩阵的受试者维度应用独立成分分析(ICA)。数据集包括 27 名 SZ 患者和 27 名完全匹配的健康对照组(HC)。这种无假设的方法发现了三个大脑子网络,它们能显著区分 SZ 和 HC。与这些子网络相关的区域主要包括视觉区、腹侧注意力区和躯体运动区,这与之前的研究结果一致。此外,从图的角度来看,这些子网络在 SZ 和 HC 之间存在显著差异,而在计算整个脑网络的相同参数(路径长度、网络强度、全局/局部效率和聚类系数)时,同样有限的数据却没有显著差异。这些子网络对 SZ 引起的连通性改变的敏感性增加,表明是否可以应用基于其连通性值的单独评分方法来对受试者进行分类。随后,根据其中两个子网络提出了一种简单的评分分类器,其灵敏度和特异性均可接受,ROC 曲线下面积为 77.5%。第三个子网络被认为是描述 SZ 改变的特异性较低的构件(模块)。它预测的个体间变化范围更广,因此被视为 SZ 生物标志物的可能性较低。这些发现证实,从模块化的角度研究大脑变化有助于找到对SZ诱导的改变更敏感的子网络。总之,我们的研究结果表明,所开发的方法能够从网络角度系统地发现 SZ 疾病引起的大脑变化。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Frontiers in Neuroinformatics
Frontiers in Neuroinformatics MATHEMATICAL & COMPUTATIONAL BIOLOGY-NEUROSCIENCES
CiteScore
4.80
自引率
5.70%
发文量
132
审稿时长
14 weeks
期刊介绍: Frontiers in Neuroinformatics publishes rigorously peer-reviewed research on the development and implementation of numerical/computational models and analytical tools used to share, integrate and analyze experimental data and advance theories of the nervous system functions. Specialty Chief Editors Jan G. Bjaalie at the University of Oslo and Sean L. Hill at the École Polytechnique Fédérale de Lausanne are supported by an outstanding Editorial Board of international experts. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics and the public worldwide. Neuroscience is being propelled into the information age as the volume of information explodes, demanding organization and synthesis. Novel synthesis approaches are opening up a new dimension for the exploration of the components of brain elements and systems and the vast number of variables that underlie their functions. Neural data is highly heterogeneous with complex inter-relations across multiple levels, driving the need for innovative organizing and synthesizing approaches from genes to cognition, and covering a range of species and disease states. Frontiers in Neuroinformatics therefore welcomes submissions on existing neuroscience databases, development of data and knowledge bases for all levels of neuroscience, applications and technologies that can facilitate data sharing (interoperability, formats, terminologies, and ontologies), and novel tools for data acquisition, analyses, visualization, and dissemination of nervous system data. Our journal welcomes submissions on new tools (software and hardware) that support brain modeling, and the merging of neuroscience databases with brain models used for simulation and visualization.
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