“RESET” Effect: Random Extending Sequences Enhance the Trans-Cleavage Activity of CRISPR/Cas12a

IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL
Jia-Yi Ma, Si-Yuan Wang, Yi-Chen Du, Dong-Xia Wang, An-Na Tang, Jing Wang* and De-Ming Kong*, 
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引用次数: 4

Abstract

The trans-cleavage activity of CRISPR/Cas12a has been widely used in biosensing applications. However, the lack of exploration on the fundamental properties of CRISPR/Cas12a not only discourages further in-depth studies of the CRISPR/Cas12a system but also limits the design space of CRISPR/Cas12a-based applications. Herein, a “RESET” effect (random extending sequences enhance trans-cleavage activity) is discovered for the activation of CRISPR/Cas12a trans-cleavage activity. That is, a single-stranded DNA, which is too short to work as the activator, can efficiently activate CRISPR/Cas12a after being extended a random sequence from its 3′-end, even when the random sequence folds into secondary structures. The finding of the “RESET” effect enriches the CRISPR/Cas12a-based sensing strategies. Based on this effect, two CRISPR/Cas12a-based biosensors are designed for the sensitive and specific detection of two biologically important enzymes.

Abstract Image

“RESET”效应:随机延伸序列增强CRISPR/Cas12a的反式切割活性
CRISPR/Cas12a的反式切割活性已在生物传感应用中得到广泛应用。然而,对CRISPR/Cas12a的基本性质缺乏探索,不仅阻碍了对CRISPR/Cas12a系统的进一步深入研究,而且限制了基于CRISPR/Cas12a应用的设计空间。在此,发现了CRISPR/Cas12a反式切割活性激活的“RESET”效应(随机延伸序列增强反式切割活动)。也就是说,单链DNA太短而不能作为激活剂,在从其3’端延伸出随机序列后,即使随机序列折叠成二级结构,也可以有效地激活CRISPR/Cas12a。“RESET”效应的发现丰富了基于CRISPR/Cas12a的传感策略。基于这种效应,设计了两种基于CRISPR/Cas12a的生物传感器,用于敏感和特异地检测两种生物重要酶。
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来源期刊
Analytical Chemistry
Analytical Chemistry 化学-分析化学
CiteScore
12.10
自引率
12.20%
发文量
1949
审稿时长
1.4 months
期刊介绍: Analytical Chemistry, a peer-reviewed research journal, focuses on disseminating new and original knowledge across all branches of analytical chemistry. Fundamental articles may explore general principles of chemical measurement science and need not directly address existing or potential analytical methodology. They can be entirely theoretical or report experimental results. Contributions may cover various phases of analytical operations, including sampling, bioanalysis, electrochemistry, mass spectrometry, microscale and nanoscale systems, environmental analysis, separations, spectroscopy, chemical reactions and selectivity, instrumentation, imaging, surface analysis, and data processing. Papers discussing known analytical methods should present a significant, original application of the method, a notable improvement, or results on an important analyte.
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