Integrated multi-omics and machine learning approach reveals the mechanism of nicotinamide alleviating PFOS-induced hepatotoxicity.

IF 5.4 1区 农林科学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Food & Function Pub Date : 2025-09-29 DOI:10.1039/d5fo02955d
Yadong Zhang, Siqi Zhu, Jingyi Ren, Huanting Pei, Rui Wen, Chongyue Zhang, Xiaoya Sun, Weijie Yang, Yuxia Ma
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Abstract

Background: Perfluorooctane sulphonate (PFOS) is a persistent environmental contaminant with well-documented hepatotoxic properties. Nicotinamide, the amide derivative of vitamin B3, is widely utilized as a nutritional supplement and exerts multiple biological benefits. Nonetheless, its potential protective effects against PFOS-induced hepatotoxicity have not yet been reported. Methods: Male mice were administered PFOS (10 mg kg-1) or vehicle by gavage for 28 days. Transcriptomics, proteomics, machine learning, and network topology algorithms were integrated to identify candidate biomarkers. Up- and down-regulated proteins were queried against the Connectivity Map (CMap) database to predict therapeutic nutrients. In vitro, AML12 cells were pretreated with varying concentrations of nicotinamide and subjected to PFOS-induced injury. The binding of nicotinamide to target proteins was assessed by molecular docking, and its protective effects were validated experimentally. Results: In vivo, PFOS exposure induced marked histological damage, inflammation, and oxidative stress in the mouse liver tissue. Integrated multi-omics analysis identified nucleophosmin (Npm1) as a potential biomarker of PFOS-induced hepatotoxicity. CMap analysis predicted nicotinamide as a candidate therapeutic nutrient. Molecular docking indicated strong binding affinity between nicotinamide and Npm1. In vitro, nicotinamide pretreatment enhanced cell viability and reduced Npm1 protein expression in PFOS-injured AML12 cells. Conclusion: Npm1 may serve as a critical biomarker of PFOS-induced liver injury. Nicotinamide exerts hepatoprotective effects by downregulating Npm1, supporting its potential as a nutritional intervention against PFOS-induced hepatotoxicity.

综合多组学和机器学习方法揭示烟酰胺减轻全氟辛烷磺酸引起的肝毒性的机制。
背景:全氟辛烷磺酸(PFOS)是一种持久性环境污染物,具有充分证明的肝毒性。烟酰胺是维生素B3的酰胺衍生物,作为一种营养补充剂被广泛使用,并具有多种生物学效益。尽管如此,其对全氟辛烷磺酸引起的肝毒性的潜在保护作用尚未报道。方法:雄性小鼠灌胃PFOS (10 mg kg-1)或载药28 d。整合转录组学、蛋白质组学、机器学习和网络拓扑算法来识别候选生物标志物。通过连接图(CMap)数据库查询上调和下调的蛋白,以预测治疗性营养素。在体外,用不同浓度的烟酰胺预处理AML12细胞,并对其进行全氟辛烷磺酸诱导的损伤。通过分子对接评估烟酰胺与靶蛋白的结合,并通过实验验证其保护作用。结果:在体内,全氟辛烷磺酸暴露引起小鼠肝组织明显的组织学损伤、炎症和氧化应激。综合多组学分析发现核磷蛋白(Npm1)是pfos诱导肝毒性的潜在生物标志物。CMap分析预测烟酰胺作为候选治疗营养素。分子对接表明烟酰胺与Npm1具有较强的结合亲和力。在体外,烟酰胺预处理可提高pfos损伤AML12细胞的细胞活力,降低Npm1蛋白的表达。结论:Npm1可能是pfos致肝损伤的重要生物标志物。烟酰胺通过下调Npm1发挥肝脏保护作用,支持其作为抗全氟辛烷磺酸引起的肝毒性的营养干预的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Food & Function
Food & Function BIOCHEMISTRY & MOLECULAR BIOLOGY-FOOD SCIENCE & TECHNOLOGY
CiteScore
10.10
自引率
6.60%
发文量
957
审稿时长
1.8 months
期刊介绍: Food & Function provides a unique venue for physicists, chemists, biochemists, nutritionists and other food scientists to publish work at the interface of the chemistry, physics and biology of food. The journal focuses on food and the functions of food in relation to health.
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