Targeted Submetabolome Profiling of Bufadienolides in Venenum Bufonis Using Scheduled Diagnostic Product Ion-Pair Filtering and Substructure Recognition-Based Strategy.

IF 2.6 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS
Xuelin Sun, Wei Ding, Zhanpeng Shang, Jiantao Qiu, Xueying Tan
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引用次数: 0

Abstract

Introduction: Venenum bufonis (VB), a traditional animal-derived medicine, exhibits significant antitumor, immunomodulatory, and analgesic activities that are primarily attributed to bufadienolides.

Objective: This study presented a novel targeted submetabolomics strategy for comprehensive profiling of bufadienolides in VB.

Material and methods: This targeted submetabolome mainly integrated scheduled diagnostic product ion (DPI) pair-based filtering and substructure recognition-based structural assembly based on the LC-MS platform. Key steps included 1) stepwise multiple ion monitoring (MIM) coupled with a dynamic exclusion function to enhance detection of minor peaks; 2) automated annotation of unconjugated bufadienolides via high-resolution extracted ion chromatograms (EICs) and a Microsoft Excel-based platform; 3) establishment of an extended tail database for conjugated bufadienolides (including dicarboxylic acid and dicarboxylic acid-amino acid conjugates) based on structural similarity and derivativity, enabling untargeted screening via validated or scheduled DPI pairs derived from MS/MS fragmentation patterns; and 4) potential conjugated bufadienolides were characterized via a substructure recognition-based strategy.

Results: The strategy identified 162 bufadienolides (39 primary, 39 secondary, and 84 tertiary) with a 96% annotation rate (155 characterized). Notably, 81 potential novel compounds were discovered, including 11 previously undescribed structural subclasses.

Conclusions: This targeted submetabolome strategy significantly expanded the diversity of bufadienolides in VB and also advanced the application of mass spectrometry in natural product discovery.

基于预定诊断产品离子对过滤和亚结构识别策略的蟾二烯内酯靶向亚代谢组分析
bufonis (VB)是一种传统的动物源性药物,具有显著的抗肿瘤、免疫调节和镇痛活性,主要归因于bufadienolides。目的:本研究提出了一种新的靶向亚代谢组学策略,用于全面分析VB中蟾二烯内酯的含量。材料与方法:该靶向亚代谢组主要集成了基于预定诊断产品离子(DPI)对的过滤和基于LC-MS平台的基于亚结构识别的结构组装。关键步骤包括:1)逐步多离子监测(MIM)与动态排除函数相结合,以增强对小峰的检测;2)利用高分辨率萃取离子色谱(EICs)和基于Microsoft excel的平台自动标注非共轭的丁二烯内酯;3)基于结构相似性和衍生性建立共轭蟾二烯内酯(包括二羧酸和二羧酸-氨基酸偶联物)扩展尾部数据库,通过MS/MS片段模式衍生的验证或预定DPI对进行非靶向筛选;4)利用基于子结构识别的策略对潜在共轭丁二烯内酯进行了表征。结果:该方法鉴定出162种丁二烯内酯(39种一级、39种二级、84种三级),注释率96%(鉴定出155种)。值得注意的是,发现了81个潜在的新化合物,包括11个以前未描述的结构亚类。结论:这种靶向亚代谢组策略显著扩大了蟾二烯内酯在VB中的多样性,并推进了质谱法在天然产物发现中的应用。
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来源期刊
Phytochemical Analysis
Phytochemical Analysis 生物-分析化学
CiteScore
6.00
自引率
6.10%
发文量
88
审稿时长
1.7 months
期刊介绍: Phytochemical Analysis is devoted to the publication of original articles concerning the development, improvement, validation and/or extension of application of analytical methodology in the plant sciences. The spectrum of coverage is broad, encompassing methods and techniques relevant to the detection (including bio-screening), extraction, separation, purification, identification and quantification of compounds in plant biochemistry, plant cellular and molecular biology, plant biotechnology, the food sciences, agriculture and horticulture. The Journal publishes papers describing significant novelty in the analysis of whole plants (including algae), plant cells, tissues and organs, plant-derived extracts and plant products (including those which have been partially or completely refined for use in the food, agrochemical, pharmaceutical and related industries). All forms of physical, chemical, biochemical, spectroscopic, radiometric, electrometric, chromatographic, metabolomic and chemometric investigations of plant products (monomeric species as well as polymeric molecules such as nucleic acids, proteins, lipids and carbohydrates) are included within the remit of the Journal. Papers dealing with novel methods relating to areas such as data handling/ data mining in plant sciences will also be welcomed.
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