Revised Diffusion Law Permits Quantitative Nanoscale Characterization of Membrane Organization

IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL
Barbora Svobodová, David Št’astný, Hans Blom, Ilya Mikhalyov, Natalia Gretskaya, Alena Balleková, Erdinc Sezgin, Martin Hof, Radek Šachl
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Abstract

The formation of functional nanoscopic domains is an inherent property of plasma membranes. Stimulated emission depletion combined with fluorescence correlation spectroscopy (STED-FCS) has been previously used to identify such domains; however, the information obtained by STED-FCS has been limited to the presence of such domains while crucial parameters have not been accessible, such as size (Rd), the fraction of occupied membrane surface (f), in-membrane lipid diffusion inside (Din) and outside (Dout) the nanodomains as well as their self-diffusion (Dd). Here, we introduce a quantitative approach based on a revised interpretation of the diffusion law. By analyzing experimentally recorded STED-FCS diffusion law plots using a comprehensive library of simulated diffusion law plots, we extract these five parameters from STED-FCS data. That approach is verified on ganglioside nanodomains in giant unilamellar vesicles, validating the Saffman-Delbrück assumption for Dd. STED-FCS data in both plasma membranes of living PtK2 cells and giant plasma membrane vesicles are examined, and a quantitative framework for molecular diffusion modes in biological membranes is presented.

Abstract Image

修订扩散法允许定量纳米级表征膜组织
功能纳米结构域的形成是质膜的固有特性。受激发射耗尽结合荧光相关光谱(STED-FCS)以前已用于识别这些结构域;然而,通过STED-FCS获得的信息仅限于这些结构域的存在,而关键参数则无法获得,例如纳米结构域内部(Rd),占据膜表面的比例(f),膜内脂质扩散(Din)和外部(Dout)以及它们的自扩散(Dd)。在这里,我们介绍了一种基于扩散定律修正解释的定量方法。通过综合模拟扩散规律图库对实验记录的STED-FCS扩散规律图进行分析,从STED-FCS数据中提取出这5个参数。该方法在巨型单层囊泡的神经节苷纳米结构域上得到了验证,验证了对Dd的saffman - delbr ck假设。研究了活PtK2细胞和巨型质膜囊泡的质膜上的STED-FCS数据,并提出了生物膜中分子扩散模式的定量框架。
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来源期刊
Analytical Chemistry
Analytical Chemistry 化学-分析化学
CiteScore
12.10
自引率
12.20%
发文量
1949
审稿时长
1.4 months
期刊介绍: Analytical Chemistry, a peer-reviewed research journal, focuses on disseminating new and original knowledge across all branches of analytical chemistry. Fundamental articles may explore general principles of chemical measurement science and need not directly address existing or potential analytical methodology. They can be entirely theoretical or report experimental results. Contributions may cover various phases of analytical operations, including sampling, bioanalysis, electrochemistry, mass spectrometry, microscale and nanoscale systems, environmental analysis, separations, spectroscopy, chemical reactions and selectivity, instrumentation, imaging, surface analysis, and data processing. Papers discussing known analytical methods should present a significant, original application of the method, a notable improvement, or results on an important analyte.
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