{"title":"Network pharmacology, docking, and molecular dynamics analysis of Sanhuang decoction in diabetic foot ulcers.","authors":"Bo Wu, Xiaohong Lan, Yang Yang, Yuekun Wang","doi":"10.1080/10255842.2025.2506798","DOIUrl":null,"url":null,"abstract":"<p><p>This study aims to systematically and comprehensively elucidate the mechanism of action of Sanhuang decoction (SHD) in the treatment of diabetic foot ulcers (DFUs). The active ingredients and potential targets of SHD, as well as the human targets associated with DFUs, were obtained from various databases, including TCMSP, GeneCards, OMIM, PharmGKB, DrugBank, and others. STRING, Cytoscape 3.10.1, and Metascape were utilized for a series of network constructions and module analyses of common targets. Subsequently, the pivotal targets were chosen for molecular docking with the principal active constituents. A comprehensive screening of 59 active compounds and 447 targets associated with SHD was conducted, resulting in the identification of 182 intersection targets. Notably, key targets involved in this study included IL10, CCL2, IL6, IFNG, IL1B, CXCL8, IL2, CXCL10, IL1A, and TNF. It found that SHD was rich in various active ingredients that regulate the targets of DFUs. Molecular dynamics simulations indicate that β-sitosterol, stigmasterol, and 5,8,2'-trihydroxy-7-methoxyflavone bind tightly to IL2. Our study provides preliminary insights into the modulatory effects of SHD on DFUs and identifies SHD as an effective strategy for treating DFUs through multi-component and multi-target modulation of the inflammatory response. Subsequent trials will be conducted to confirm that the above findings are expected to help improve personalized treatment for patients with DFUs.</p>","PeriodicalId":50640,"journal":{"name":"Computer Methods in Biomechanics and Biomedical Engineering","volume":" ","pages":"1-18"},"PeriodicalIF":1.7000,"publicationDate":"2025-05-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer Methods in Biomechanics and Biomedical Engineering","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1080/10255842.2025.2506798","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
引用次数: 0
Abstract
This study aims to systematically and comprehensively elucidate the mechanism of action of Sanhuang decoction (SHD) in the treatment of diabetic foot ulcers (DFUs). The active ingredients and potential targets of SHD, as well as the human targets associated with DFUs, were obtained from various databases, including TCMSP, GeneCards, OMIM, PharmGKB, DrugBank, and others. STRING, Cytoscape 3.10.1, and Metascape were utilized for a series of network constructions and module analyses of common targets. Subsequently, the pivotal targets were chosen for molecular docking with the principal active constituents. A comprehensive screening of 59 active compounds and 447 targets associated with SHD was conducted, resulting in the identification of 182 intersection targets. Notably, key targets involved in this study included IL10, CCL2, IL6, IFNG, IL1B, CXCL8, IL2, CXCL10, IL1A, and TNF. It found that SHD was rich in various active ingredients that regulate the targets of DFUs. Molecular dynamics simulations indicate that β-sitosterol, stigmasterol, and 5,8,2'-trihydroxy-7-methoxyflavone bind tightly to IL2. Our study provides preliminary insights into the modulatory effects of SHD on DFUs and identifies SHD as an effective strategy for treating DFUs through multi-component and multi-target modulation of the inflammatory response. Subsequent trials will be conducted to confirm that the above findings are expected to help improve personalized treatment for patients with DFUs.
期刊介绍:
The primary aims of Computer Methods in Biomechanics and Biomedical Engineering are to provide a means of communicating the advances being made in the areas of biomechanics and biomedical engineering and to stimulate interest in the continually emerging computer based technologies which are being applied in these multidisciplinary subjects. Computer Methods in Biomechanics and Biomedical Engineering will also provide a focus for the importance of integrating the disciplines of engineering with medical technology and clinical expertise. Such integration will have a major impact on health care in the future.