Genetic algorithm-optimized artificial neural network for multi-objective optimization of biomass and exopolysaccharide production by Haloferax mediterranei.

IF 3.5 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Bioprocess and Biosystems Engineering Pub Date : 2025-05-01 Epub Date: 2025-03-22 DOI:10.1007/s00449-025-03143-3
Alaa M Al Rawahi, Mohd Zafar, Taqi Ahmed Khan, Sara Al Araimi, Biswanath Mahanty, Shishir Kumar Behera
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引用次数: 0

Abstract

Microbial production of industrially important exopolysaccharide (EPS) from extremophiles has several advantages. In this study, key media components (i.e., sucrose, yeast extract, and urea) were optimized for biomass growth and extracellular EPS production in Haloferax mediterranei DSM 1411 using Box-Behnken design. In a multi-objective optimization framework, response surface methodology (RSM) and genetic algorithm (GA)-optimized artificial neural network (ANN) were used to minimize biomass growth while increasing EPS production. The performance of the selected ANN model for the prediction of biomass and EPS (R2: 0.964 and 0.975, respectively) was found to be better than that of the multiple regression model (R2: 0.818, 0.963, respectively). The main effect of sucrose and its interaction with urea appears to have a significant effect on both responses. The ANN model projects an increase in EPS production from 4.49 to 18.2 g l-1 while shifting the priority from biomass to biopolymer. The optimized condition predicted a maximum biomass and EPS production of 17.27 g l-1 and 17.80 g l-1, respectively, at concentrations of sucrose (19.98 g l-1), yeast extract (1.97 g l-1), and urea (1.99 g l-1). Based on multi-objective optimization, the GA-ANN model predicted an increase in the EPS to biomass ratio for increasing the EPS and associated biomass production. The extracted EPS, identified as Gellan gum through NMR spectroscopy, was further characterized for surface and elemental composition using SEM-EDX analysis.

利用嗜极微生物生产工业上重要的外多糖(EPS)具有多种优势。在本研究中,采用盒-贝肯设计(Box-Behnken design)对关键培养基成分(即蔗糖、酵母提取物和尿素)进行了优化,以促进Haloferax mediterranei DSM 1411的生物量生长和胞外多糖生产。在多目标优化框架中,采用了响应面方法学(RSM)和遗传算法(GA)优化的人工神经网络(ANN),以在提高 EPS 产量的同时尽量减少生物量的增长。结果发现,所选人工神经网络模型在预测生物量和 EPS 方面的性能(R2 分别为 0.964 和 0.975)优于多元回归模型(R2 分别为 0.818 和 0.963)。蔗糖的主效应及其与尿素的交互作用似乎对两种反应都有显著影响。ANN 模型预测 EPS 产量将从 4.49 克升至 18.2 克升至 1 克,同时优先考虑的因素从生物量转向生物聚合物。在蔗糖(19.98 克升-1)、酵母提取物(1.97 克升-1)和尿素(1.99 克升-1)浓度下,优化条件预测的最大生物量和 EPS 产量分别为 17.27 克升-1 和 17.80 克升-1。基于多目标优化,GA-ANN 模型预测了 EPS 与生物量的比率,以提高 EPS 和相关生物量的产量。提取的 EPS 通过核磁共振光谱鉴定为结冷胶,并通过 SEM-EDX 分析进一步确定了其表面和元素组成。
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来源期刊
Bioprocess and Biosystems Engineering
Bioprocess and Biosystems Engineering 工程技术-工程:化工
CiteScore
7.90
自引率
2.60%
发文量
147
审稿时长
2.6 months
期刊介绍: Bioprocess and Biosystems Engineering provides an international peer-reviewed forum to facilitate the discussion between engineering and biological science to find efficient solutions in the development and improvement of bioprocesses. The aim of the journal is to focus more attention on the multidisciplinary approaches for integrative bioprocess design. Of special interest are the rational manipulation of biosystems through metabolic engineering techniques to provide new biocatalysts as well as the model based design of bioprocesses (up-stream processing, bioreactor operation and downstream processing) that will lead to new and sustainable production processes. Contributions are targeted at new approaches for rational and evolutive design of cellular systems by taking into account the environment and constraints of technical production processes, integration of recombinant technology and process design, as well as new hybrid intersections such as bioinformatics and process systems engineering. Manuscripts concerning the design, simulation, experimental validation, control, and economic as well as ecological evaluation of novel processes using biosystems or parts thereof (e.g., enzymes, microorganisms, mammalian cells, plant cells, or tissue), their related products, or technical devices are also encouraged. The Editors will consider papers for publication based on novelty, their impact on biotechnological production and their contribution to the advancement of bioprocess and biosystems engineering science. Submission of papers dealing with routine aspects of bioprocess engineering (e.g., routine application of established methodologies, and description of established equipment) are discouraged.
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