Leveraging high-throughput molecular simulations and machine learning for the design of chemical mixtures

IF 9.4 1区 材料科学 Q1 CHEMISTRY, PHYSICAL
Alex K. Chew, Mohammad Atif Faiz Afzal, Zachary Kaplan, Eric M. Collins, Suraj Gattani, Mayank Misra, Anand Chandrasekaran, Karl Leswing, Mathew D. Halls
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Abstract

Mixtures of chemical ingredients, such as formulations, are ubiquitous in materials science, but optimizing their properties remains challenging due to the vast design space. Computational approaches offer a promising solution to traverse this space while minimizing trial-and-error experimentation. Using high-throughput classical molecular dynamics simulations, we generated a comprehensive dataset of over 30,000 solvent mixtures to evaluate three machine learning approaches that connect molecular structure and composition to property: formulation descriptor aggregation (FDA), formulation graph (FG), and Set2Set-based method (FDS2S). Our results demonstrate that our new FDS2S approach outperforms other approaches in predicting simulation-derived properties. Formulation-property relationships can reveal important substructures and identify promising formulations at least two to three times faster than random guessing. The models show robust transferability to experimental datasets, accurately predicting properties across energy, pharmaceutical, and petroleum applications. Our research demonstrates the utility of high-throughput simulations and machine learning tools to design formulations with promising properties.

Abstract Image

利用高通量分子模拟和机器学习来设计化学混合物
化学成分的混合物,如配方,在材料科学中无处不在,但由于巨大的设计空间,优化其性能仍然具有挑战性。计算方法提供了一个很有前途的解决方案来遍历这个空间,同时最大限度地减少试错实验。使用高通量经典分子动力学模拟,我们生成了超过30,000种溶剂混合物的综合数据集,以评估三种将分子结构和组成与性质联系起来的机器学习方法:配方描述符聚集(FDA),配方图(FG)和基于set2set的方法(FDS2S)。我们的研究结果表明,我们的新FDS2S方法在预测模拟衍生特性方面优于其他方法。公式-性质关系可以揭示重要的子结构,并比随机猜测至少快两到三倍。该模型具有强大的实验数据集可移植性,可以准确预测能源、制药和石油应用的性质。我们的研究证明了高通量模拟和机器学习工具在设计具有前景的配方方面的实用性。
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来源期刊
npj Computational Materials
npj Computational Materials Mathematics-Modeling and Simulation
CiteScore
15.30
自引率
5.20%
发文量
229
审稿时长
6 weeks
期刊介绍: npj Computational Materials is a high-quality open access journal from Nature Research that publishes research papers applying computational approaches for the design of new materials and enhancing our understanding of existing ones. The journal also welcomes papers on new computational techniques and the refinement of current approaches that support these aims, as well as experimental papers that complement computational findings. Some key features of npj Computational Materials include a 2-year impact factor of 12.241 (2021), article downloads of 1,138,590 (2021), and a fast turnaround time of 11 days from submission to the first editorial decision. The journal is indexed in various databases and services, including Chemical Abstracts Service (ACS), Astrophysics Data System (ADS), Current Contents/Physical, Chemical and Earth Sciences, Journal Citation Reports/Science Edition, SCOPUS, EI Compendex, INSPEC, Google Scholar, SCImago, DOAJ, CNKI, and Science Citation Index Expanded (SCIE), among others.
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