Aptamer-Based Diagnosis for Plasmodium vivax Specific Malaria

IF 4 2区 医学 Q2 CHEMISTRY, MEDICINAL
Mohd Shoeb Alam, Abhijeet Dhiman, Tanu Bhardwaj, Sudarshana Chatterjee, Vaishali Lakra, Manish Tripathi, Khusboo Lohani, Yagya Dutt Sharma, Bijay Ranjan Mirdha, Amit Kumar, Tarun Kumar Sharma* and Sumit Rathore*, 
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Abstract

Malaria, caused by a protozoan parasite of the genus Plasmodium, is a severe infectious disease with life-threatening consequences that has burdened mankind for centuries. Although Plasmodium falciparum (P. falciparum) malaria is more prevalent globally than Plasmodium vivax (P. vivax) malaria, India bears the largest burden of P. vivax malaria, with over 3.6 million cases accounting for ∼48% of global P. vivax malaria cases. Existing detection methods for P. vivax malaria are costly or tedious or have low accuracy. To address the need for a specific diagnostic assay for P. vivax, we generated aptamers specific to Plasmodium vivax tryptophan-rich antigen (PvTRAg). We employed them in an aptamer-linked immobilized sorbent assay (ALISA) to detect P. vivax malaria infections. The two most specific aptamers for PvTRAg, identified as Apt_14 and Apt_16, were obtained using the Systematic Evolution of Ligands by Exponential Enrichment. The dissociation constant (KD) values of Apt_14 and Apt_16 were 1.9 and 1.2 nM, respectively, indicating high affinity to PvTRAg. The limit of detection for both aptamers was found to be 2.5 nM. During clinical validation, the sensitivity of 96% and 84% was obtained with Apt_14- and Apt_16-based ALISA with 100% specificity. The aptamers demonstrated nonsignificant cross-reactivity with other nonmalarial antigens and PvTRAg homologues along with a high level of selectivity for PvTRAg over P. falciparum antigens and various other antigens. Altogether, our findings confirm the effectiveness of DNA aptamers for the accurate diagnosis of P. vivax malaria and lay the groundwork for developing an aptamer-based diagnostic assay for malaria.

Abstract Image

基于适配体的间日疟原虫特异性疟疾诊断
疟疾由疟原虫属原生动物寄生虫引起,是一种严重的传染病,其后果危及生命,几个世纪以来一直困扰着人类。尽管在全球范围内,恶性疟原虫疟疾比间日疟原虫疟疾更为普遍,但印度是间日疟原虫疟疾的最大负担国,有360多万例间日疟原虫疟疾病例,占全球间日疟原虫疟疾病例的48%。现有的间日疟检测方法昂贵、繁琐、准确性低。为了解决间日疟原虫特异性诊断检测的需要,我们生成了间日疟原虫富含色氨酸抗原(PvTRAg)特异性适配体。我们将它们用于适配体连接固定吸附试验(ALISA)检测间日疟原虫疟疾感染。利用指数富集配体的系统进化方法获得了PvTRAg的两个最特异的适体Apt_14和Apt_16。Apt_14和Apt_16的解离常数(KD)分别为1.9 nM和1.2 nM,表明Apt_14和Apt_16对PvTRAg具有较高的亲和力。两种适体的检出限均为2.5 nM。在临床验证中,基于Apt_14和apt_16的ALISA的灵敏度分别为96%和84%,特异性为100%。该适体与其他非疟疾抗原和PvTRAg同源物表现出不显著的交叉反应性,PvTRAg对恶性疟原虫抗原和各种其他抗原具有很高的选择性。总之,我们的研究结果证实了DNA适体对间日疟原虫疟疾准确诊断的有效性,并为开发基于适体的疟疾诊断方法奠定了基础。
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来源期刊
ACS Infectious Diseases
ACS Infectious Diseases CHEMISTRY, MEDICINALINFECTIOUS DISEASES&nb-INFECTIOUS DISEASES
CiteScore
9.70
自引率
3.80%
发文量
213
期刊介绍: ACS Infectious Diseases will be the first journal to highlight chemistry and its role in this multidisciplinary and collaborative research area. The journal will cover a diverse array of topics including, but not limited to: * Discovery and development of new antimicrobial agents — identified through target- or phenotypic-based approaches as well as compounds that induce synergy with antimicrobials. * Characterization and validation of drug target or pathways — use of single target and genome-wide knockdown and knockouts, biochemical studies, structural biology, new technologies to facilitate characterization and prioritization of potential drug targets. * Mechanism of drug resistance — fundamental research that advances our understanding of resistance; strategies to prevent resistance. * Mechanisms of action — use of genetic, metabolomic, and activity- and affinity-based protein profiling to elucidate the mechanism of action of clinical and experimental antimicrobial agents. * Host-pathogen interactions — tools for studying host-pathogen interactions, cellular biochemistry of hosts and pathogens, and molecular interactions of pathogens with host microbiota. * Small molecule vaccine adjuvants for infectious disease. * Viral and bacterial biochemistry and molecular biology.
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