Identification and expression of a hydrophobic carboxylic acid reductase from Trichoderma virens.

IF 2.2 4区 生物学 Q3 MICROBIOLOGY
Andrew B H Goh, Jonathan G Ling, Shazilah Kamaruddin, Abdul M A Murad, Farah D Abu Bakar
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引用次数: 0

Abstract

Carboxylic acid reductases (CARs) have been garnering attention in applications for the sustainable synthesis of aldehydes. Despite numerous discoveries, not all characteristics of CAR enzymes have been extensively studied or understood. Herein, we report the discovery and expression of a new CAR enzyme (TvirCAR2) from the ascomycetous fungus, Trichoderma virens. Tvircar2 is one of the five putative CARs identified from analyses of the T. virens genome. In silico, analyses showed that TvirCAR2 has a high hydrophobicity index and that its corresponding gene is part of a biosynthetic gene cluster predicted to synthesize hybrid polyketide synthases-nonribosomal peptide synthetase secondary metabolites. TvirCAR2 was highly expressed as soluble and insoluble forms in an Escherichia coli expression host. The solubility of the purified TvirCAR2 necessitated the addition of glycerol in the purification and assay buffers. Substrate screening via molecular docking showed that benzoic acid was a suitable substrate candidate. The TvirCAR2 enzyme catalyzed the reduction of benzoic acid with a specific activity of around 1.4 µmol/h/mg. Homologs, which are predicted to exhibit similar hydrophobicity, are the CARs from Stachybotrys bisbyi (StbB), which is involved in the production of the meroterpenoid, ilicicolin B, and Trichoderma reesei (TrCAR), which is part of a similar but still uncharacterized biosynthetic gene cluster.

绿木霉疏水性羧酸还原酶的鉴定与表达。
羧酸还原酶(CARs)在醛类化合物的可持续合成中得到了广泛的应用。尽管有许多发现,但并非CAR酶的所有特性都得到了广泛的研究或了解。在此,我们报道了一种新的CAR酶(TvirCAR2)的发现和表达,这种酶来自子囊真菌,木霉。Tvircar2是从T. virens基因组分析中鉴定出的五个假定的car之一。计算机分析表明,TvirCAR2具有较高的疏水性指数,其对应的基因是一个生物合成基因簇的一部分,预计将合成PKS-NRPS杂交次生代谢物。TvirCAR2在大肠杆菌表达宿主中以可溶性和不溶性形式高度表达。纯化后的TvirCAR2的溶解度需要在纯化和测定缓冲液中添加甘油。通过分子对接筛选底物表明苯甲酸是一个合适的底物候选物。TvirCAR2酶催化苯甲酸还原,比活性约为1.4µmol/h/mg。预计具有类似疏水性的同源物是来自bisbyi Stachybotrys (StbB)的car,它参与了萜类化合物ilicicolin B的产生,以及来自reesei木霉(TrCAR)的car,后者是类似但尚未表征的生物合成基因簇的一部分。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Fems Microbiology Letters
Fems Microbiology Letters 生物-微生物学
CiteScore
4.30
自引率
0.00%
发文量
112
审稿时长
1.9 months
期刊介绍: FEMS Microbiology Letters gives priority to concise papers that merit rapid publication by virtue of their originality, general interest and contribution to new developments in microbiology. All aspects of microbiology, including virology, are covered. 2019 Impact Factor: 1.987, Journal Citation Reports (Source Clarivate, 2020) Ranking: 98/135 (Microbiology) The journal is divided into eight Sections: Physiology and Biochemistry (including genetics, molecular biology and ‘omic’ studies) Food Microbiology (from food production and biotechnology to spoilage and food borne pathogens) Biotechnology and Synthetic Biology Pathogens and Pathogenicity (including medical, veterinary, plant and insect pathogens – particularly those relating to food security – with the exception of viruses) Environmental Microbiology (including ecophysiology, ecogenomics and meta-omic studies) Virology (viruses infecting any organism, including Bacteria and Archaea) Taxonomy and Systematics (for publication of novel taxa, taxonomic reclassifications and reviews of a taxonomic nature) Professional Development (including education, training, CPD, research assessment frameworks, research and publication metrics, best-practice, careers and history of microbiology) If you are unsure which Section is most appropriate for your manuscript, for example in the case of transdisciplinary studies, we recommend that you contact the Editor-In-Chief by email prior to submission. Our scope includes any type of microorganism - all members of the Bacteria and the Archaea and microbial members of the Eukarya (yeasts, filamentous fungi, microbial algae, protozoa, oomycetes, myxomycetes, etc.) as well as all viruses.
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