Rapid single flax (Linum usitatissimum) seed phenotyping of oil and other quality traits using single kernel near infrared spectroscopy

IF 1.9 4区 农林科学 Q3 CHEMISTRY, APPLIED
Paul R. Armstrong, Gokhan Hacisalihoglu
{"title":"Rapid single flax (Linum usitatissimum) seed phenotyping of oil and other quality traits using single kernel near infrared spectroscopy","authors":"Paul R. Armstrong,&nbsp;Gokhan Hacisalihoglu","doi":"10.1002/aocs.12875","DOIUrl":null,"url":null,"abstract":"<p>The growing interest in the rapid measurement of seed ingredients using single-kernel NIR (SKNIR) spectroscopy as a nondestructive measurement technique allows fast analysis of sample seed variance that can have effects on breeding and end-use processing. Flax (<i>Linum usitatissimum</i>), an oilseed crop grown in the Northwest United States and worldwide, is highly beneficial for human health, food, and fiber. Its health benefits include its high protein and omega-3 fatty acids content. Therefore, seed composition profiles are an important aspect of breeding. The goals of this research were the development of single seed NIR calibration models for protein, oil, and weight of intact flax seeds. In this study, SKNIR spectroscopy was used on a diverse set of flax accessions comprising of 306 samples to create prediction models on a custom built SKNIR instrument. Spectra data and reference protein, oil, and weight were used to build partial least squares (PLS) models. Calibration models provided reasonable prediction of these traits and could be used for screening purposes. PLS statistics were oil (<i>R</i><sup>2</sup> = 0.82, SEP = 1.72), weight (<i>R</i><sup>2</sup> = 0.74, SEP = 0.71), and protein (<i>R</i><sup>2</sup> = 0.62, SEP = 0.96) for validation data sets comprising of one-third of the total samples. In conclusion, prediction models showed that SKNIR spectroscopy could be a very beneficial nondestructive technique to determine oil and weight as well as rapid screening of protein in single flax seeds while not requiring extensive preparation as compared to traditional techniques.</p>","PeriodicalId":17182,"journal":{"name":"Journal of the American Oil Chemists Society","volume":"102 1","pages":"115-123"},"PeriodicalIF":1.9000,"publicationDate":"2024-06-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of the American Oil Chemists Society","FirstCategoryId":"97","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/aocs.12875","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, APPLIED","Score":null,"Total":0}
引用次数: 0

Abstract

The growing interest in the rapid measurement of seed ingredients using single-kernel NIR (SKNIR) spectroscopy as a nondestructive measurement technique allows fast analysis of sample seed variance that can have effects on breeding and end-use processing. Flax (Linum usitatissimum), an oilseed crop grown in the Northwest United States and worldwide, is highly beneficial for human health, food, and fiber. Its health benefits include its high protein and omega-3 fatty acids content. Therefore, seed composition profiles are an important aspect of breeding. The goals of this research were the development of single seed NIR calibration models for protein, oil, and weight of intact flax seeds. In this study, SKNIR spectroscopy was used on a diverse set of flax accessions comprising of 306 samples to create prediction models on a custom built SKNIR instrument. Spectra data and reference protein, oil, and weight were used to build partial least squares (PLS) models. Calibration models provided reasonable prediction of these traits and could be used for screening purposes. PLS statistics were oil (R2 = 0.82, SEP = 1.72), weight (R2 = 0.74, SEP = 0.71), and protein (R2 = 0.62, SEP = 0.96) for validation data sets comprising of one-third of the total samples. In conclusion, prediction models showed that SKNIR spectroscopy could be a very beneficial nondestructive technique to determine oil and weight as well as rapid screening of protein in single flax seeds while not requiring extensive preparation as compared to traditional techniques.

Abstract Image

单粒近红外光谱法快速分型亚麻籽油及其他品质性状
使用单粒近红外(SKNIR)光谱作为一种无损测量技术,对种子成分的快速测量越来越感兴趣,可以快速分析样品种子方差,这可能对育种和最终用途加工产生影响。亚麻(Linum usitatissimum)是一种生长在美国西北部和世界各地的油籽作物,对人体健康、食物和纤维都非常有益。它的健康益处包括其高蛋白和omega-3脂肪酸含量。因此,种子组成谱是育种的一个重要方面。本研究的目的是建立完整亚麻种子蛋白质、油脂和重量的单种子近红外校准模型。在这项研究中,SKNIR光谱被用于多种亚麻产品,包括306个样品,并在定制的SKNIR仪器上建立预测模型。利用光谱数据和参考蛋白、油和重量建立偏最小二乘(PLS)模型。校正模型提供了这些性状的合理预测,可用于筛选目的。对于占总样本三分之一的验证数据集,PLS统计量分别为油(R2 = 0.82, SEP = 1.72)、重量(R2 = 0.74, SEP = 0.71)和蛋白质(R2 = 0.62, SEP = 0.96)。综上所述,预测模型表明,与传统技术相比,SKNIR光谱技术可以作为一种非常有益的非破坏性技术,用于测定亚麻种子的油脂和重量以及快速筛选单个亚麻种子中的蛋白质,而且不需要大量的准备。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
4.10
自引率
5.00%
发文量
95
审稿时长
2.4 months
期刊介绍: The Journal of the American Oil Chemists’ Society (JAOCS) is an international peer-reviewed journal that publishes significant original scientific research and technological advances on fats, oils, oilseed proteins, and related materials through original research articles, invited reviews, short communications, and letters to the editor. We seek to publish reports that will significantly advance scientific understanding through hypothesis driven research, innovations, and important new information pertaining to analysis, properties, processing, products, and applications of these food and industrial resources. Breakthroughs in food science and technology, biotechnology (including genomics, biomechanisms, biocatalysis and bioprocessing), and industrial products and applications are particularly appropriate. JAOCS also considers reports on the lipid composition of new, unique, and traditional sources of lipids that definitively address a research hypothesis and advances scientific understanding. However, the genus and species of the source must be verified by appropriate means of classification. In addition, the GPS location of the harvested materials and seed or vegetative samples should be deposited in an accredited germplasm repository. Compositional data suitable for Original Research Articles must embody replicated estimate of tissue constituents, such as oil, protein, carbohydrate, fatty acid, phospholipid, tocopherol, sterol, and carotenoid compositions. Other components unique to the specific plant or animal source may be reported. Furthermore, lipid composition papers should incorporate elements of year­to­year, environmental, and/ or cultivar variations through use of appropriate statistical analyses.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信