Lennard van den Berg, Nick Ramsey, Mathijs Raemaekers
{"title":"Enhancing fMRI quality control.","authors":"Lennard van den Berg, Nick Ramsey, Mathijs Raemaekers","doi":"10.1016/j.jneumeth.2024.110337","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>fMRI in clinical settings faces challenges affecting activity maps. Template matching can screen for abnormal results by providing an objective metric of activity map quality. This research tests how sample size, age, or gender-specific templates, and unilateral templates affect template matching results.</p><p><strong>New method: </strong>We used an fMRI database of 76 healthy subjects performing 7 tasks assessing motor, language, and working memory functions. Templates were created with varying numbers of subjects, genders, and ages. Individual subjects were compared to templates using leave-one-out cross validation. We also compared unilateral and bilateral templates.</p><p><strong>Results: </strong>Increasing sample size improved template matches, with diminishing returns for larger sample sizes. Gender and age-specific templates increased correlations for some tasks, with age having a larger effect than gender. Generally, templates including all subjects provided the highest correlations, indicating that age and gender effects did not outweigh the benefits of larger sample sizes. Unilateral templates of the task-dominant hemisphere increased template correlations.</p><p><strong>Conclusions: </strong>Age and gender affect templates, but the benefits depend on the database size. When the database is large enough, age and gender effects are beneficial. Unilateral templates enhance template matching, but practical benefits depend on the severity of neurological abnormalities in patients.</p>","PeriodicalId":16415,"journal":{"name":"Journal of Neuroscience Methods","volume":" ","pages":"110337"},"PeriodicalIF":2.7000,"publicationDate":"2024-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Neuroscience Methods","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1016/j.jneumeth.2024.110337","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
Background: fMRI in clinical settings faces challenges affecting activity maps. Template matching can screen for abnormal results by providing an objective metric of activity map quality. This research tests how sample size, age, or gender-specific templates, and unilateral templates affect template matching results.
New method: We used an fMRI database of 76 healthy subjects performing 7 tasks assessing motor, language, and working memory functions. Templates were created with varying numbers of subjects, genders, and ages. Individual subjects were compared to templates using leave-one-out cross validation. We also compared unilateral and bilateral templates.
Results: Increasing sample size improved template matches, with diminishing returns for larger sample sizes. Gender and age-specific templates increased correlations for some tasks, with age having a larger effect than gender. Generally, templates including all subjects provided the highest correlations, indicating that age and gender effects did not outweigh the benefits of larger sample sizes. Unilateral templates of the task-dominant hemisphere increased template correlations.
Conclusions: Age and gender affect templates, but the benefits depend on the database size. When the database is large enough, age and gender effects are beneficial. Unilateral templates enhance template matching, but practical benefits depend on the severity of neurological abnormalities in patients.
期刊介绍:
The Journal of Neuroscience Methods publishes papers that describe new methods that are specifically for neuroscience research conducted in invertebrates, vertebrates or in man. Major methodological improvements or important refinements of established neuroscience methods are also considered for publication. The Journal''s Scope includes all aspects of contemporary neuroscience research, including anatomical, behavioural, biochemical, cellular, computational, molecular, invasive and non-invasive imaging, optogenetic, and physiological research investigations.