Identification of Active Ingredients in Ginseng Volatile Oil: A Strategy Combining Computer Virtual Screening With Experimental Validation.

IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS
Jie Yang, Zhiying Yu, Siyuan Li, Weijiang Zhang, Jianghua He, Xiaoyang Qu, Yunpeng Qi, Yihui Yin, Jingjing Wu, Lijuan Chen, Ling Dong, Wenjuan Xu
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Abstract

Background: Ginseng volatile oil (GVO) is a valuable active ingredient in ginseng (Panax ginseng C. A. Mey.) with high research potential. Drying procedures alter the real composition of the fresh material, for example, the evaporation of compounds with low boiling point. In this study, the composition of volatile oil in fresh ginseng (FG), sun-dried ginseng (SDG), and red ginseng (RD) was systematically analyzed to clarify the dominant components of FG and their potential pharmacological effects, which provides a basis for application and development of FG.

Methodology: GVO was obtained through water vapor distillation and analyzed using GC-MS. Pattern recognition analysis was employed to differentiate components in three processed types of ginseng. Based on this analysis, the active ingredients and key targets were screened. The binding mode and affinity were verified using molecular docking technology. Finally, the anticancer activity of GVO was verified by cell experiments.

Results: A total of 53 components were identified in three processed types of ginseng by GC-MS. Among them, 32 differential components were screened by pattern recognition analysis. Ultimately, 6 active ingredients (panaxydol, nerolidyl acetate, falcarinol, cis-β-farnesene, γ-elemene, and β-elemene) and 15 key targets were determined by network pharmacology analysis. Molecular docking results revealed that β-elemene exhibited a higher affinity with EGFR, ESR1, and ERK2. Cell experiments indicated that GVO promotes apoptosis in cancer cells.

Conclusion: This research proposed a strategy that integrated "component detection-virtual multitarget screening-active component prediction-experimental verification" to expedite the identification of active ingredients, providing insights for application of FG and the development of functional products.

人参挥发油中活性成分的鉴定:计算机虚拟筛选与实验验证相结合的策略。
背景:人参挥发油(GVO)是人参(Panax ginseng C. A. Mey.)干燥过程会改变新鲜材料的实际成分,例如低沸点化合物的蒸发。本研究系统分析了新鲜人参(FG)、晒干人参(SDG)和红参(RD)中的挥发油成分,以明确FG的主要成分及其潜在的药理作用,为FG的应用和开发提供依据:方法:通过水蒸气蒸馏获得龙胆紫,并使用气相色谱-质谱仪进行分析。方法:通过水蒸气蒸馏法获得 GVO,并采用气相色谱-质谱法进行分析。在此基础上,筛选出有效成分和关键靶点。利用分子对接技术验证了其结合模式和亲和力。最后,通过细胞实验验证了龙胆泻肝素的抗癌活性:结果:通过气相色谱-质谱(GC-MS)鉴定出三种加工人参中的 53 种成分。结果:通过气相色谱-质谱(GC-MS)鉴定出三种加工人参中的 53 种成分,并通过模式识别分析筛选出 32 种差异成分。最终,通过网络药理学分析确定了 6 种有效成分(三七醇、乙酸橙花酯、镰刀醇、顺式-β-法呢烯、γ-榄香烯和β-榄香烯)和 15 个关键靶点。分子对接结果显示,β-榄香烯与表皮生长因子受体(EGFR)、表皮生长因子受体(ESR1)和ERK2具有更高的亲和力。细胞实验表明,GVO 可促进癌细胞凋亡:该研究提出了 "成分检测-虚拟多目标筛选-活性成分预测-实验验证 "一体化的策略,加快了活性成分的鉴定,为FG的应用和功能性产品的开发提供了启示。
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来源期刊
Phytochemical Analysis
Phytochemical Analysis 生物-分析化学
CiteScore
6.00
自引率
6.10%
发文量
88
审稿时长
1.7 months
期刊介绍: Phytochemical Analysis is devoted to the publication of original articles concerning the development, improvement, validation and/or extension of application of analytical methodology in the plant sciences. The spectrum of coverage is broad, encompassing methods and techniques relevant to the detection (including bio-screening), extraction, separation, purification, identification and quantification of compounds in plant biochemistry, plant cellular and molecular biology, plant biotechnology, the food sciences, agriculture and horticulture. The Journal publishes papers describing significant novelty in the analysis of whole plants (including algae), plant cells, tissues and organs, plant-derived extracts and plant products (including those which have been partially or completely refined for use in the food, agrochemical, pharmaceutical and related industries). All forms of physical, chemical, biochemical, spectroscopic, radiometric, electrometric, chromatographic, metabolomic and chemometric investigations of plant products (monomeric species as well as polymeric molecules such as nucleic acids, proteins, lipids and carbohydrates) are included within the remit of the Journal. Papers dealing with novel methods relating to areas such as data handling/ data mining in plant sciences will also be welcomed.
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