Targeted Discovery of a Natural ortho-Quinone Methide Precursor and Green Generation of Its Oligomers.

IF 3.3 2区 生物学 Q2 CHEMISTRY, MEDICINAL
Journal of Natural Products Pub Date : 2024-09-27 Epub Date: 2024-08-28 DOI:10.1021/acs.jnatprod.4c00035
Xiao-Xia Wang, Bei-Qian Deng, Zhi-Qiu Ouyang, Yang Yan, Jian-Ming Lv, Sheng-Ying Qin, Dan Hu, Guo-Dong Chen, Xin-Sheng Yao, Hao Gao
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引用次数: 0

Abstract

ortho-Quinone methides (o-QMs) are a class of highly reactive intermediates that serve as important nonisolable building blocks (NBBs) in organic synthesis and small-molecule library construction. Because of their instability and nonisolability, most reported o-QMs are generated through in situ chemical synthesis, and only a few natural o-QMs have been reported due to the lack of directed discovery strategies. Herein, a new natural o-QM precursor (trichophenol A, 2) was identified from the fungal strain of Trichoderma sp. AT0167 through genome mining, which was generated by trilA (nonreducing polyketide synthase) and trilB (2-oxoglutarate dependent dioxygenase). Combinatorial biosynthesis via two other known NRPKS genes with trilA and trilB was performed, leading to the generation of five new trichophenol o-QM oligomers (trichophenols D-H, 5-9). The strategy combining genome mining with combinatorial biosynthesis not only targetedly uncovered a new natural o-QM precursor but also produced various new molecules through oligomerization of the new o-QM and its designated o-QM acceptors without chemical synthesis and isolation of intermediates, which was named NBB genome mining-combinatorial biosynthesis strategy for o-QM molecule library construction. This study provides a new strategy for the targeted discovery of natural o-QMs and small-molecule library construction with natural o-QMs.

Abstract Image

天然原醌甲醚前体的靶向发现及其低聚物的绿色生成。
邻醌甲酰胺(o-QMs)是一类高活性中间体,是有机合成和小分子化合物库构建中重要的不可分离构筑基块(NBBs)。由于其不稳定性和不可分离性,大多数报道的 o-QMs 都是通过原位化学合成生成的,由于缺乏定向发现策略,只有少数天然 o-QMs 被报道。本文通过基因组挖掘,从毛霉菌株 AT0167 中发现了一种新的天然邻甲氧基苯酚前体(毛霉酚 A, 2),它是由 trilA(非还原多酮合成酶)和 trilB(2-氧代戊二酸依赖性二氧酶)生成的。通过另外两个已知的 NRPKS 基因与 trilA 和 trilB 进行组合生物合成,产生了五种新的三苯酚邻-QM 低聚物(三苯酚 D-H,5-9)。这种将基因组挖掘与组合生物合成相结合的策略不仅有针对性地发现了一种新的天然邻-QM前体,而且通过新的邻-QM及其指定的邻-QM受体的低聚作用产生了多种新分子,而无需进行化学合成和中间产物分离,这种策略被命名为构建邻-QM分子库的NBB基因组挖掘-组合生物合成策略。该研究为定向发现天然 o-QMs 和利用天然 o-QMs 构建小分子库提供了一种新策略。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
9.10
自引率
5.90%
发文量
294
审稿时长
2.3 months
期刊介绍: The Journal of Natural Products invites and publishes papers that make substantial and scholarly contributions to the area of natural products research. Contributions may relate to the chemistry and/or biochemistry of naturally occurring compounds or the biology of living systems from which they are obtained. Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin. When new compounds are reported, manuscripts describing their biological activity are much preferred. Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.
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