Network Pharmacology Combined with Molecular Docking Approach to Investigate the Mechanism of ChuShiWeiLing Decoction Against Perianal Eczema

IF 2.6 4区 医学 Q2 PHARMACOLOGY & PHARMACY
Ying Liu, Min Hao, Xinyue Fang, Yifei Qian, Yahui Wang, Shuai Yan
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Abstract

Background: ChuShiWeiLing Decoction (CSWLD) is a famous classical Chinese prescription for the treatment of eczema with desirable effect in clinical practice. It has gradually exerted good curative effects on perianal eczema (PE) in recent years, but its specific mechanism is not elucidated yet. Objective: This research explores the underlying pharmacological mechanism of CSWLD in addressing PE through network pharmacology combined with molecular docking strategy. Methods: The key chemical compounds and potential target genes of CSWLD were screened by bioinformatics. The major targets of CSWLD were discovered using network modules. Functional annotation of Gene Ontology (GO) was undertaken, as well as pathway enrichment analysis using the Kyoto Encyclopedia of Genes and Genomes (KEGG). Molecular docking of core protein-ligand interactions was modeled using AutoDock software. Pymol software was used to perform a molecular dynamics simulation for the ideal core protein-ligand that was discovered by molecular docking. Results: A total of 2,853 active compounds and 922 targets of CSWLD were collected. The target with a higher degree was identified through the PPI network, namely TNF, IL6, ALB, STAT3, EGFR, TLR4, CXCL8 and PTPRC. GO and KEGG analyses suggested that CSWLD treatment of PE mainly involves cellular activation, activation of leukocytes, and adhesion among leukocytes. The molecular docking results showed that wogonin, hederagenin and quercetin of CSWLD could bind to IL-6 and TNF, respectively. Conclusion: Our results indicated that the bioactives, potential targets, and molecular mechanism of CSWLD against PE.
网络药理学结合分子对接法探究首乌藤煎剂治疗肛周湿疹的机制
背景:朱砂威灵仙汤(CSWLD)是中医治疗湿疹的经典名方,在临床实践中疗效显著。近年来,它对肛周湿疹(PE)逐渐发挥了良好的疗效,但其具体机制尚未阐明。研究目的本研究通过网络药理学结合分子对接策略,探讨CSWLD治疗肛周湿疹的潜在药理机制。研究方法通过生物信息学方法筛选 CSWLD 的关键化合物和潜在靶基因。利用网络模块发现了 CSWLD 的主要靶点。对基因本体(GO)进行了功能注释,并利用京都基因和基因组百科全书(KEGG)进行了通路富集分析。使用 AutoDock 软件建立了核心蛋白质-配体相互作用的分子对接模型。使用 Pymol 软件对分子对接发现的理想核心蛋白-配体进行分子动力学模拟。结果:共收集到 2853 个活性化合物和 922 个 CSWLD 靶点。通过 PPI 网络确定了较高程度的靶点,即 TNF、IL6、ALB、STAT3、EGFR、TLR4、CXCL8 和 PTPRC。GO和KEGG分析表明,CSWLD治疗PE主要涉及细胞活化、白细胞活化和白细胞间粘附。分子对接结果表明,CSWLD 中的沃戈宁(wogonin)、赤芍素(hederagenin)和槲皮素(quercetin)可分别与 IL-6 和 TNF 结合。结论我们的研究结果表明,CSWLD 具有抗 PE 的生物活性、潜在靶点和分子机制。
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来源期刊
CiteScore
6.30
自引率
0.00%
发文量
302
审稿时长
2 months
期刊介绍: Current Pharmaceutical Design publishes timely in-depth reviews and research articles from leading pharmaceutical researchers in the field, covering all aspects of current research in rational drug design. Each issue is devoted to a single major therapeutic area guest edited by an acknowledged authority in the field. Each thematic issue of Current Pharmaceutical Design covers all subject areas of major importance to modern drug design including: medicinal chemistry, pharmacology, drug targets and disease mechanism.
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