Automated lung tumor segmentation robust to various tumor sizes using a consistency learning-based multi-scale dual-attention network.

IF 1.7 3区 医学 Q3 INSTRUMENTS & INSTRUMENTATION
Jumin Lee, Min-Jin Lee, Bong-Seog Kim, Helen Hong
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Abstract

Background: It is often difficult to automatically segment lung tumors due to the large tumor size variation ranging from less than 1 cm to greater than 7 cm depending on the T-stage.

Objective: This study aims to accurately segment lung tumors of various sizes using a consistency learning-based multi-scale dual-attention network (CL-MSDA-Net).

Methods: To avoid under- and over-segmentation caused by different ratios of lung tumors and surrounding structures in the input patch according to the size of the lung tumor, a size-invariant patch is generated by normalizing the ratio to the average size of the lung tumors used for the training. Two input patches, a size-invariant patch and size-variant patch are trained on a consistency learning-based network consisting of dual branches that share weights to generate a similar output for each branch with consistency loss. The network of each branch has a multi-scale dual-attention module that learns image features of different scales and uses channel and spatial attention to enhance the scale-attention ability to segment lung tumors of different sizes.

Results: In experiments with hospital datasets, CL-MSDA-Net showed an F1-score of 80.49%, recall of 79.06%, and precision of 86.78%. This resulted in 3.91%, 3.38%, and 2.95% higher F1-scores than the results of U-Net, U-Net with a multi-scale module, and U-Net with a multi-scale dual-attention module, respectively. In experiments with the NSCLC-Radiomics datasets, CL-MSDA-Net showed an F1-score of 71.7%, recall of 68.24%, and precision of 79.33%. This resulted in 3.66%, 3.38%, and 3.13% higher F1-scores than the results of U-Net, U-Net with a multi-scale module, and U-Net with a multi-scale dual-attention module, respectively.

Conclusions: CL-MSDA-Net improves the segmentation performance on average for tumors of all sizes with significant improvements especially for small sized tumors.

基于一致性学习的多尺度双注意网络对不同肿瘤大小的鲁棒肺肿瘤自动分割。
背景:由于肺肿瘤的t分期不同,肿瘤的大小变化很大,从小于1cm到大于7cm不等,因此通常很难自动分割肺肿瘤。目的:利用基于一致性学习的多尺度双注意网络(CL-MSDA-Net)对不同大小的肺肿瘤进行准确分割。方法:为了避免输入补片中肺肿瘤与周围结构根据肺肿瘤的大小比例不同而导致分割不足和分割过度,将用于训练的肺肿瘤的平均大小比例归一化,生成一个大小不变的补片。在一个基于一致性学习的网络上训练两个输入补丁,一个大小不变的补丁和一个大小可变的补丁,该网络由共享权重的双分支组成,为每个具有一致性损失的分支生成相似的输出。每个分支网络都有一个多尺度双注意模块,学习不同尺度的图像特征,利用通道和空间注意增强尺度-注意能力,对不同大小的肺肿瘤进行分割。结果:在医院数据集的实验中,CL-MSDA-Net的f1得分为80.49%,召回率为79.06%,准确率为86.78%。与U-Net、多尺度双注意模块U-Net和多尺度双注意模块U-Net相比,其f1得分分别提高了3.91%、3.38%和2.95%。在NSCLC-Radiomics数据集的实验中,CL-MSDA-Net的f1评分为71.7%,召回率为68.24%,准确率为79.33%。与U-Net、多尺度双注意模块U-Net和多尺度双注意模块U-Net相比,其f1得分分别提高了3.66%、3.38%和3.13%。结论:CL-MSDA-Net平均提高了各种大小肿瘤的分割性能,特别是对小肿瘤的分割效果显著。
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来源期刊
CiteScore
4.90
自引率
23.30%
发文量
150
审稿时长
3 months
期刊介绍: Research areas within the scope of the journal include: Interaction of x-rays with matter: x-ray phenomena, biological effects of radiation, radiation safety and optical constants X-ray sources: x-rays from synchrotrons, x-ray lasers, plasmas, and other sources, conventional or unconventional Optical elements: grazing incidence optics, multilayer mirrors, zone plates, gratings, other diffraction optics Optical instruments: interferometers, spectrometers, microscopes, telescopes, microprobes
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