从红树林沉积物中分离出的沉积假单胞菌。

IF 2 3区 生物学 Q4 MICROBIOLOGY
Lirui Liu, Jiayi Li, Yuhan Huang, Jie Pan, Meng Li
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引用次数: 0

摘要

从中国深圳的红树林表层沉积物样本中分离到一种革兰氏阴性、兼性好氧、卵形到棒状的活动细菌FT324T。通过系统发育、生理、生化和化学分类等综合分析确定菌株FT324T的分类位置。菌株FT324T在20-40°C(最适30-37°C)、pH 5.0-9.0(最适pH 8.0)和0- 3% (w/v) NaCl(最适1%)条件下生长。其16S rRNA基因全长序列与橄榄冷杆菌XJ4T相似度最高(97.4%),其次为反硝化假硫单胞菌DSM 18921T(96.62%)、伪硫clava arenosa CAU 1312T(96.54%)和硝化还原德氟单胞菌DL5-4T(96.47%)。FT324T的主要脂肪酸(> 10%)为C19: 0环ω8c(51.9%)和总特征8(29.6%)。主要呼吸醌为Q-10。其极性脂质谱包含磷脂酰乙醇胺、磷脂酰甲基乙醇胺、磷脂酰甘油、二磷脂酰甘油、一种未识别的氨基脂、一种未识别的脂质和两种未识别的磷脂。估计其基因组大小为4 294 115 bp,基因组DNA G+C含量为69.6 mol%。根据其独特的表型、化学分类和系统发育特征,菌株FT324T应该是Defluviimonas属的一个新种,建议将其命名为Defluviimonas sediminis sp. nov (=MCCC 1K07685T=KCTC 92477T)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Defluviimonas sediminis sp. nov., isolated from mangrove sediment.

A Gram-stain-negative, facultatively aerobic, motile and ovoid- to rod-shaped bacterium, designated as FT324T, was isolated from a surface mangrove sediment sample from Shenzhen, PR China. The taxonomic position of strain FT324T was determined by a combination of phylogenetic, physiological, biochemical and chemotaxonomic analyses. Strain FT324T grew at 20-40 °C (optimum, 30-37 °C), pH 5.0-9.0 (optimum, pH 8.0) and in the presence of 0-3 % (w/v) NaCl (optimum, 1 %). Its full-length 16S rRNA gene sequence was the most similar to Frigidibacter oleivorans XJ4T (97.4 %), followed by Defluviimonas denitrificans DSM 18921T (96.62 %), Pseudothioclava arenosa CAU 1312T (96.54 %) and Defluviimonas nitratireducens DL5-4T (96.47 %). The major fatty acids (>10 %) of FT324T were C19 : 0 cyclo ω8c (51.9 %) and summed feature 8(29.6 %). The predominant respiratory quinone was Q-10. Its polar lipid profile contained phosphatidylethanolamine, phosphatidylmethylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, one unidentified aminolipid, one unidentified lipid and two unidentified phospholipids. Its estimated genome size was 4 294 115 bp and the genomic DNA G+C content was 69.6 mol%. Based on its distinct phenotypic, chemotaxonomic and phylogenetic characteristics, strain FT324T should represent a novel species of the genus Defluviimonas, for which the name Defluviimonas sediminis sp. nov. is proposed (=MCCC 1K07685T=KCTC 92477T).

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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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