聚焦生物传感器:从定量生物学的角度看问题。

Quantitative Plant Biology Pub Date : 2021-10-12 eCollection Date: 2021-01-01 DOI:10.1017/qpb.2021.10
James H Rowe, Alexander M Jones
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引用次数: 0

摘要

近年来,对量化体内分子和分子事件感兴趣的植物生物学家已开始使用可直接感知分析物的基因编码荧光生物传感器(GEFB)来补充报告系统。这种生物传感器可以测量单个细胞的水平和时间。事实证明,这些信息对于有兴趣在硅学中表现生物现象的数学建模者来说非常有价值,因为改进测量结果可以指导改进模型构建和模型参数化。合成生物学的进步加快了生物传感器的开发步伐,同时表达光谱兼容的生物传感器现在可以量化信号网络中的多个节点。对于直接对刺激做出反应的生物传感器来说,将其定位到特定的细胞区室,就能观察到分析物在不同细胞器中的不同积累情况,从而为活性氧/钙信号和光合作用研究带来启示。结合改进的图像分析方法,生物传感器成像技术的进步有助于实现实验与数学建模之间的闭环。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Focus on biosensors: Looking through the lens of quantitative biology.

Focus on biosensors: Looking through the lens of quantitative biology.

Focus on biosensors: Looking through the lens of quantitative biology.

In recent years, plant biologists interested in quantifying molecules and molecular events in vivo have started to complement reporter systems with genetically encoded fluorescent biosensors (GEFBs) that directly sense an analyte. Such biosensors can allow measurements at the level of individual cells and over time. This information is proving valuable to mathematical modellers interested in representing biological phenomena in silico, because improved measurements can guide improved model construction and model parametrisation. Advances in synthetic biology have accelerated the pace of biosensor development, and the simultaneous expression of spectrally compatible biosensors now allows quantification of multiple nodes in signalling networks. For biosensors that directly respond to stimuli, targeting to specific cellular compartments allows the observation of differential accumulation of analytes in distinct organelles, bringing insights to reactive oxygen species/calcium signalling and photosynthesis research. In conjunction with improved image analysis methods, advances in biosensor imaging can help close the loop between experimentation and mathematical modelling.

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