鱼腥鱼PCC7120对林丹的响应:林丹潜在基因的生理效应和差异表达

IF 3.9 3区 生物学 Q2 MICROBIOLOGY
MicrobiologyOpen Pub Date : 2023-04-27 DOI:10.1002/mbo3.1355
Jorge Guío, Maria F. Fillat, Maria L. Peleato, Emma Sevilla
{"title":"鱼腥鱼PCC7120对林丹的响应:林丹潜在基因的生理效应和差异表达","authors":"Jorge Guío,&nbsp;Maria F. Fillat,&nbsp;Maria L. Peleato,&nbsp;Emma Sevilla","doi":"10.1002/mbo3.1355","DOIUrl":null,"url":null,"abstract":"<p>Lindane (γ-HCH) is an organochlorine pesticide that causes huge environmental concerns worldwide due to its recalcitrance and toxicity. The use of the cyanobacterium <i>Anabaena</i> sp. PCC 7120 in aquatic lindane bioremediation has been suggested but information relative to this process is scarce. In the present work, data relative to the growth, pigment composition, photosynthetic/respiration rate, and oxidative stress response of <i>Anabaena</i> sp. PCC 7120 in the presence of lindane at its solubility limit in water are shown. In addition, lindane degradation experiments revealed almost a total disappearance of lindane in the supernatants of <i>Anabaena</i> sp. PCC 7120 culture after 6 days of incubation. The diminishing in lindane concentration was in concordance with an increase in the levels of trichlorobenzene inside the cells. Furthermore, to identify potential orthologs of the <i>linA, linB, linC, linD, linE</i>, and <i>linR</i> genes from <i>Sphingomonas paucimobilis</i> B90A in <i>Anabaena</i> sp. PCC 7120, a whole genome screening was performed allowing the identification of five putative <i>lin</i> orthologs (<i>all1353</i> and <i>all0193</i> putative orthologs of <i>linB, all3836</i> putative orthologs of <i>linC</i>, and <i>all0352</i> and <i>alr0353</i> putative orthologs of <i>linE</i> and <i>linR</i>, respectively) which could be involved in the lindane degradation pathway. Differential expression analysis of these genes in the presence of lindane revealed strong upregulation of one of the potential <i>lin</i> genes of <i>Anabaena</i> sp. PCC 7120.</p>","PeriodicalId":18573,"journal":{"name":"MicrobiologyOpen","volume":"12 3","pages":""},"PeriodicalIF":3.9000,"publicationDate":"2023-04-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/mbo3.1355","citationCount":"0","resultStr":"{\"title\":\"Responses of Anabaena sp. PCC7120 to lindane: Physiological effects and differential expression of potential lin genes\",\"authors\":\"Jorge Guío,&nbsp;Maria F. Fillat,&nbsp;Maria L. Peleato,&nbsp;Emma Sevilla\",\"doi\":\"10.1002/mbo3.1355\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Lindane (γ-HCH) is an organochlorine pesticide that causes huge environmental concerns worldwide due to its recalcitrance and toxicity. The use of the cyanobacterium <i>Anabaena</i> sp. PCC 7120 in aquatic lindane bioremediation has been suggested but information relative to this process is scarce. In the present work, data relative to the growth, pigment composition, photosynthetic/respiration rate, and oxidative stress response of <i>Anabaena</i> sp. PCC 7120 in the presence of lindane at its solubility limit in water are shown. In addition, lindane degradation experiments revealed almost a total disappearance of lindane in the supernatants of <i>Anabaena</i> sp. PCC 7120 culture after 6 days of incubation. The diminishing in lindane concentration was in concordance with an increase in the levels of trichlorobenzene inside the cells. Furthermore, to identify potential orthologs of the <i>linA, linB, linC, linD, linE</i>, and <i>linR</i> genes from <i>Sphingomonas paucimobilis</i> B90A in <i>Anabaena</i> sp. PCC 7120, a whole genome screening was performed allowing the identification of five putative <i>lin</i> orthologs (<i>all1353</i> and <i>all0193</i> putative orthologs of <i>linB, all3836</i> putative orthologs of <i>linC</i>, and <i>all0352</i> and <i>alr0353</i> putative orthologs of <i>linE</i> and <i>linR</i>, respectively) which could be involved in the lindane degradation pathway. Differential expression analysis of these genes in the presence of lindane revealed strong upregulation of one of the potential <i>lin</i> genes of <i>Anabaena</i> sp. PCC 7120.</p>\",\"PeriodicalId\":18573,\"journal\":{\"name\":\"MicrobiologyOpen\",\"volume\":\"12 3\",\"pages\":\"\"},\"PeriodicalIF\":3.9000,\"publicationDate\":\"2023-04-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://onlinelibrary.wiley.com/doi/epdf/10.1002/mbo3.1355\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"MicrobiologyOpen\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/mbo3.1355\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"MicrobiologyOpen","FirstCategoryId":"99","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/mbo3.1355","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

林丹(γ-HCH)是一种有机氯农药,由于其顽固性和毒性在世界范围内引起了巨大的环境问题。蓝藻Anabaena sp. pcc7120已被建议用于水生林丹生物修复,但有关该过程的信息很少。本文报道了林丹在水中溶解度极限条件下,水藻(Anabaena sp. PCC 7120)的生长、色素组成、光合/呼吸速率和氧化应激反应的相关数据。此外,林丹降解实验表明,经过6天的培养,林丹在Anabaena sp. PCC 7120的上清液中几乎完全消失。林丹浓度的下降与细胞内三氯苯水平的增加是一致的。此外,为了鉴定少动鞘单胞菌B90A在Anabaena sp. PCC 7120中linA、linB、linC、linD、linE和linR基因的潜在同源基因,我们进行了全基因组筛选,鉴定了5个可能参与林丹降解途径的lin同源基因(linB的all1353和all0193推定同源基因,linC的all3836推定同源基因,linE和linR的all0352和alr0353推定同源基因)。这些基因在林丹存在下的差异表达分析显示,Anabaena sp. PCC 7120的一个潜在林丹基因明显上调。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Responses of Anabaena sp. PCC7120 to lindane: Physiological effects and differential expression of potential lin genes

Responses of Anabaena sp. PCC7120 to lindane: Physiological effects and differential expression of potential lin genes

Lindane (γ-HCH) is an organochlorine pesticide that causes huge environmental concerns worldwide due to its recalcitrance and toxicity. The use of the cyanobacterium Anabaena sp. PCC 7120 in aquatic lindane bioremediation has been suggested but information relative to this process is scarce. In the present work, data relative to the growth, pigment composition, photosynthetic/respiration rate, and oxidative stress response of Anabaena sp. PCC 7120 in the presence of lindane at its solubility limit in water are shown. In addition, lindane degradation experiments revealed almost a total disappearance of lindane in the supernatants of Anabaena sp. PCC 7120 culture after 6 days of incubation. The diminishing in lindane concentration was in concordance with an increase in the levels of trichlorobenzene inside the cells. Furthermore, to identify potential orthologs of the linA, linB, linC, linD, linE, and linR genes from Sphingomonas paucimobilis B90A in Anabaena sp. PCC 7120, a whole genome screening was performed allowing the identification of five putative lin orthologs (all1353 and all0193 putative orthologs of linB, all3836 putative orthologs of linC, and all0352 and alr0353 putative orthologs of linE and linR, respectively) which could be involved in the lindane degradation pathway. Differential expression analysis of these genes in the presence of lindane revealed strong upregulation of one of the potential lin genes of Anabaena sp. PCC 7120.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
MicrobiologyOpen
MicrobiologyOpen MICROBIOLOGY-
CiteScore
8.00
自引率
0.00%
发文量
78
审稿时长
20 weeks
期刊介绍: MicrobiologyOpen is a peer reviewed, fully open access, broad-scope, and interdisciplinary journal delivering rapid decisions and fast publication of microbial science, a field which is undergoing a profound and exciting evolution in this post-genomic era. The journal aims to serve the research community by providing a vehicle for authors wishing to publish quality research in both fundamental and applied microbiology. Our goal is to publish articles that stimulate discussion and debate, as well as add to our knowledge base and further the understanding of microbial interactions and microbial processes. MicrobiologyOpen gives prompt and equal consideration to articles reporting theoretical, experimental, applied, and descriptive work in all aspects of bacteriology, virology, mycology and protistology, including, but not limited to: - agriculture - antimicrobial resistance - astrobiology - biochemistry - biotechnology - cell and molecular biology - clinical microbiology - computational, systems, and synthetic microbiology - environmental science - evolutionary biology, ecology, and systematics - food science and technology - genetics and genomics - geobiology and earth science - host-microbe interactions - infectious diseases - natural products discovery - pharmaceutical and medicinal chemistry - physiology - plant pathology - veterinary microbiology We will consider submissions across unicellular and cell-cluster organisms: prokaryotes (bacteria, archaea) and eukaryotes (fungi, protists, microalgae, lichens), as well as viruses and prions infecting or interacting with microorganisms, plants and animals, including genetic, biochemical, biophysical, bioinformatic and structural analyses. The journal features Original Articles (including full Research articles, Method articles, and Short Communications), Commentaries, Reviews, and Editorials. Original papers must report well-conducted research with conclusions supported by the data presented in the article. We also support confirmatory research and aim to work with authors to meet reviewer expectations. MicrobiologyOpen publishes articles submitted directly to the journal and those referred from other Wiley journals.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信