基于与活性氧物种相关的基因特征的胶质母细胞瘤预后和免疫景观

IF 4.3 3区 材料科学 Q1 ENGINEERING, ELECTRICAL & ELECTRONIC
ACS Applied Electronic Materials Pub Date : 2023-03-01 Epub Date: 2022-07-02 DOI:10.1007/s12017-022-08719-w
Prashant Kaushal, Junle Zhu, Zhiping Wan, Huairui Chen, Jingliang Ye, Chun Luo
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引用次数: 0

摘要

胶质母细胞瘤(GBM)是恶性程度最高、侵袭性最强的原发性脑肿瘤,对目前的治疗策略有很强的抵抗力。以往的研究表明,活性氧(ROS)在 GBM 的信号转导调节和免疫抑制环境中发挥着重要作用。为了进一步研究 ROS 在 GBM 的预后、肿瘤微环境(TME)和免疫治疗反应中的作用,我们使用 Lasso-Cox 回归方法构建了 ROS 相关的九个基因特征,并使用我们研究中的其他三个数据集(基于标志性 ROS 通路相关基因集和癌症基因组图谱 GBM 数据集)进行了验证。我们使用 R 软件分析了高风险亚组和低风险亚组在预后、TME 评分、免疫细胞浸润、免疫检查点表达水平和药物敏感性方面的差异。总之,我们的研究为原发性GBM发现了一种新的ROS相关预后模型,该模型可作为GBM临床诊断的潜在工具,并有助于评估ROS在GBM肿瘤发生和免疫抑制过程中的免疫和分子特征。我们的研究还发现,ROS相关基因-HSPB1、LSP1和PTX3的表达与定量RT-PCR验证的肿瘤相关巨噬细胞(TAMs)和M2巨噬细胞的细胞标志物密切相关,这表明它们可能是GBM免疫治疗的潜在靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Prognosis and Immune Landscapes in Glioblastoma Based on Gene-Signature Related to Reactive-Oxygen-Species.

Prognosis and Immune Landscapes in Glioblastoma Based on Gene-Signature Related to Reactive-Oxygen-Species.

Glioblastoma (GBM) is the most malignant and aggressive primary brain tumor and is highly resistant to current therapeutic strategies. Previous studies have demonstrated that reactive oxygen species (ROS) play an important role in the regulation of signal transduction and immunosuppressive environment in GBM. To further study the role of ROS in prognosis, tumor micro-environment (TME) and immunotherapeutic response in GBM, an ROS-related nine-gene signature was constructed using the Lasso-Cox regression method and validated using three other datasets in our research, based on the hallmark ROS-pathway-related gene sets and the Cancer Genome Atlas GBM dataset. Differences in prognosis, TME scores, immune cell infiltration, immune checkpoint expression levels, and drug sensitivity between high-risk and low-risk subgroups were analyzed using R software. Collectively, our research uncovered a novel ROS-related prognostic model for primary GBM, which could prove to be a potential tool for clinical diagnosis of GBM, and help assess the immune and molecular characteristics of ROS in the tumorigenesis and immunosuppression of GBM. Our research also revealed that the expressions of ROS-related genes-HSPB1, LSP1, and PTX3-were closely related to the cell markers of tumor-associated macrophages (TAMs) and M2 macrophages validated by quantitative RT-PCR, suggesting them could be potential targets of immunotherapy for GBM.

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CiteScore
7.20
自引率
4.30%
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