Biplab Kumar Bhowmick, Sayantika Sarkar, Dipasree Roychowdhury, Sayali D Patil, Manoj M Lekhak, Deepak Ohri, Satyawada Rama Rao, S R Yadav, R C Verma, Manoj K Dhar, S N Raina, Sumita Jha
{"title":"Allium细胞遗传学:对印度分类群的评述。","authors":"Biplab Kumar Bhowmick, Sayantika Sarkar, Dipasree Roychowdhury, Sayali D Patil, Manoj M Lekhak, Deepak Ohri, Satyawada Rama Rao, S R Yadav, R C Verma, Manoj K Dhar, S N Raina, Sumita Jha","doi":"10.3897/CompCytogen.17.98903","DOIUrl":null,"url":null,"abstract":"<p><p>The genus <i>Allium</i> Linnaeus, 1753 (tribe Allieae) contains about 800 species worldwide of which almost 38 species are reported in India, including the globally important crops (onion, garlic, leek, shallot) and many wild species. A satisfactory chromosomal catalogue of <i>Allium</i> species is missing which has been considered in the review for the species occurring in India. The most prominent base number is x=8, with few records of x=7, 10, 11. The genome size has sufficient clues for divergence, ranging from 7.8 pg/1C to 30.0 pg/1C in diploid and 15.16 pg/1C to 41.78 pg/1C in polyploid species. Although the karyotypes are seemingly dominated by metacentrics, substantial variation in nucleolus organizing regions (NORs) is noteworthy. The chromosomal rearrangement between <i>A.cepa</i> Linnaeus, 1753 and its allied species has paved way to appreciate genomic evolution within <i>Allium</i>. The presence of a unique telomere sequence and its conservation in <i>Allium</i> sets this genus apart from all other Amaryllids and supports monophyletic origin. Any cytogenetic investigation regarding NOR variability, telomere sequence and genome size in the Indian species becomes the most promising field to decipher chromosome evolution against the background of species diversity and evolution, especially in the Indian subcontinent.</p>","PeriodicalId":50656,"journal":{"name":"Comparative Cytogenetics","volume":"17 ","pages":"129-156"},"PeriodicalIF":1.0000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10252142/pdf/","citationCount":"0","resultStr":"{\"title\":\"<i>Allium</i> cytogenetics: a critical review on the Indian taxa.\",\"authors\":\"Biplab Kumar Bhowmick, Sayantika Sarkar, Dipasree Roychowdhury, Sayali D Patil, Manoj M Lekhak, Deepak Ohri, Satyawada Rama Rao, S R Yadav, R C Verma, Manoj K Dhar, S N Raina, Sumita Jha\",\"doi\":\"10.3897/CompCytogen.17.98903\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The genus <i>Allium</i> Linnaeus, 1753 (tribe Allieae) contains about 800 species worldwide of which almost 38 species are reported in India, including the globally important crops (onion, garlic, leek, shallot) and many wild species. A satisfactory chromosomal catalogue of <i>Allium</i> species is missing which has been considered in the review for the species occurring in India. The most prominent base number is x=8, with few records of x=7, 10, 11. The genome size has sufficient clues for divergence, ranging from 7.8 pg/1C to 30.0 pg/1C in diploid and 15.16 pg/1C to 41.78 pg/1C in polyploid species. Although the karyotypes are seemingly dominated by metacentrics, substantial variation in nucleolus organizing regions (NORs) is noteworthy. The chromosomal rearrangement between <i>A.cepa</i> Linnaeus, 1753 and its allied species has paved way to appreciate genomic evolution within <i>Allium</i>. The presence of a unique telomere sequence and its conservation in <i>Allium</i> sets this genus apart from all other Amaryllids and supports monophyletic origin. Any cytogenetic investigation regarding NOR variability, telomere sequence and genome size in the Indian species becomes the most promising field to decipher chromosome evolution against the background of species diversity and evolution, especially in the Indian subcontinent.</p>\",\"PeriodicalId\":50656,\"journal\":{\"name\":\"Comparative Cytogenetics\",\"volume\":\"17 \",\"pages\":\"129-156\"},\"PeriodicalIF\":1.0000,\"publicationDate\":\"2023-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10252142/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Comparative Cytogenetics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.3897/CompCytogen.17.98903\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Comparative Cytogenetics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3897/CompCytogen.17.98903","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
Allium cytogenetics: a critical review on the Indian taxa.
The genus Allium Linnaeus, 1753 (tribe Allieae) contains about 800 species worldwide of which almost 38 species are reported in India, including the globally important crops (onion, garlic, leek, shallot) and many wild species. A satisfactory chromosomal catalogue of Allium species is missing which has been considered in the review for the species occurring in India. The most prominent base number is x=8, with few records of x=7, 10, 11. The genome size has sufficient clues for divergence, ranging from 7.8 pg/1C to 30.0 pg/1C in diploid and 15.16 pg/1C to 41.78 pg/1C in polyploid species. Although the karyotypes are seemingly dominated by metacentrics, substantial variation in nucleolus organizing regions (NORs) is noteworthy. The chromosomal rearrangement between A.cepa Linnaeus, 1753 and its allied species has paved way to appreciate genomic evolution within Allium. The presence of a unique telomere sequence and its conservation in Allium sets this genus apart from all other Amaryllids and supports monophyletic origin. Any cytogenetic investigation regarding NOR variability, telomere sequence and genome size in the Indian species becomes the most promising field to decipher chromosome evolution against the background of species diversity and evolution, especially in the Indian subcontinent.
期刊介绍:
Comparative Cytogenetics is a peer-reviewed, open-access, rapid online journal launched to accelerate research on all aspects of plant and animal cytogenetics, karyosystematics, and molecular systematics.
All published papers can be freely copied, downloaded, printed and distributed at no charge for the reader. Authors are thus encouraged to post the pdf files of published papers on their homepages or elsewhere to expedite distribution. There is no charge for color.