Changryong Baek, Benjamin Leinwand, Kristen A Lindquist, Seok-Oh Jeong, Joseph Hopfinger, Katheleen M Gates, Vladas Pipiras
{"title":"检测相关网络的变化,并将其应用于 fMRI 数据的功能连接。","authors":"Changryong Baek, Benjamin Leinwand, Kristen A Lindquist, Seok-Oh Jeong, Joseph Hopfinger, Katheleen M Gates, Vladas Pipiras","doi":"10.1007/s11336-023-09908-7","DOIUrl":null,"url":null,"abstract":"<p><p>Research questions in the human sciences often seek to answer if and when a process changes across time. In functional MRI studies, for instance, researchers may seek to assess the onset of a shift in brain state. For daily diary studies, the researcher may seek to identify when a person's psychological process shifts following treatment. The timing and presence of such a change may be meaningful in terms of understanding state changes. Currently, dynamic processes are typically quantified as static networks where edges indicate temporal relations among nodes, which may be variables reflecting emotions, behaviors, or brain activity. Here we describe three methods for detecting changes in such correlation networks from a data-driven perspective. Networks here are quantified using the lag-0 pair-wise correlation (or covariance) estimates as the representation of the dynamic relations among variables. We present three methods for change point detection: dynamic connectivity regression, max-type method, and a PCA-based method. The change point detection methods each include different ways to test if two given correlation network patterns from different segments in time are significantly different. These tests can also be used outside of the change point detection approaches to test any two given blocks of data. We compare the three methods for change point detection as well as the complementary significance testing approaches on simulated and empirical functional connectivity fMRI data examples.</p>","PeriodicalId":54534,"journal":{"name":"Psychometrika","volume":"88 2","pages":"636-655"},"PeriodicalIF":2.9000,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Detecting Changes in Correlation Networks with Application to Functional Connectivity of fMRI Data.\",\"authors\":\"Changryong Baek, Benjamin Leinwand, Kristen A Lindquist, Seok-Oh Jeong, Joseph Hopfinger, Katheleen M Gates, Vladas Pipiras\",\"doi\":\"10.1007/s11336-023-09908-7\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Research questions in the human sciences often seek to answer if and when a process changes across time. In functional MRI studies, for instance, researchers may seek to assess the onset of a shift in brain state. For daily diary studies, the researcher may seek to identify when a person's psychological process shifts following treatment. The timing and presence of such a change may be meaningful in terms of understanding state changes. Currently, dynamic processes are typically quantified as static networks where edges indicate temporal relations among nodes, which may be variables reflecting emotions, behaviors, or brain activity. Here we describe three methods for detecting changes in such correlation networks from a data-driven perspective. Networks here are quantified using the lag-0 pair-wise correlation (or covariance) estimates as the representation of the dynamic relations among variables. We present three methods for change point detection: dynamic connectivity regression, max-type method, and a PCA-based method. The change point detection methods each include different ways to test if two given correlation network patterns from different segments in time are significantly different. These tests can also be used outside of the change point detection approaches to test any two given blocks of data. We compare the three methods for change point detection as well as the complementary significance testing approaches on simulated and empirical functional connectivity fMRI data examples.</p>\",\"PeriodicalId\":54534,\"journal\":{\"name\":\"Psychometrika\",\"volume\":\"88 2\",\"pages\":\"636-655\"},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2023-06-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Psychometrika\",\"FirstCategoryId\":\"102\",\"ListUrlMain\":\"https://doi.org/10.1007/s11336-023-09908-7\",\"RegionNum\":2,\"RegionCategory\":\"心理学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2023/3/9 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q1\",\"JCRName\":\"MATHEMATICS, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Psychometrika","FirstCategoryId":"102","ListUrlMain":"https://doi.org/10.1007/s11336-023-09908-7","RegionNum":2,"RegionCategory":"心理学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2023/3/9 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"MATHEMATICS, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
Detecting Changes in Correlation Networks with Application to Functional Connectivity of fMRI Data.
Research questions in the human sciences often seek to answer if and when a process changes across time. In functional MRI studies, for instance, researchers may seek to assess the onset of a shift in brain state. For daily diary studies, the researcher may seek to identify when a person's psychological process shifts following treatment. The timing and presence of such a change may be meaningful in terms of understanding state changes. Currently, dynamic processes are typically quantified as static networks where edges indicate temporal relations among nodes, which may be variables reflecting emotions, behaviors, or brain activity. Here we describe three methods for detecting changes in such correlation networks from a data-driven perspective. Networks here are quantified using the lag-0 pair-wise correlation (or covariance) estimates as the representation of the dynamic relations among variables. We present three methods for change point detection: dynamic connectivity regression, max-type method, and a PCA-based method. The change point detection methods each include different ways to test if two given correlation network patterns from different segments in time are significantly different. These tests can also be used outside of the change point detection approaches to test any two given blocks of data. We compare the three methods for change point detection as well as the complementary significance testing approaches on simulated and empirical functional connectivity fMRI data examples.
期刊介绍:
The journal Psychometrika is devoted to the advancement of theory and methodology for behavioral data in psychology, education and the social and behavioral sciences generally. Its coverage is offered in two sections: Theory and Methods (T& M), and Application Reviews and Case Studies (ARCS). T&M articles present original research and reviews on the development of quantitative models, statistical methods, and mathematical techniques for evaluating data from psychology, the social and behavioral sciences and related fields. Application Reviews can be integrative, drawing together disparate methodologies for applications, or comparative and evaluative, discussing advantages and disadvantages of one or more methodologies in applications. Case Studies highlight methodology that deepens understanding of substantive phenomena through more informative data analysis, or more elegant data description.