机器学习方法和额叶区提取成分的非线性处理预测重度抑郁症的rTMS治疗反应。

IF 3.1 4区 医学 Q2 NEUROSCIENCES
Elias Ebrahimzadeh, Farahnaz Fayaz, Lila Rajabion, Masoud Seraji, Fatemeh Aflaki, Ahmad Hammoud, Zahra Taghizadeh, Mostafa Asgarinejad, Hamid Soltanian-Zadeh
{"title":"机器学习方法和额叶区提取成分的非线性处理预测重度抑郁症的rTMS治疗反应。","authors":"Elias Ebrahimzadeh,&nbsp;Farahnaz Fayaz,&nbsp;Lila Rajabion,&nbsp;Masoud Seraji,&nbsp;Fatemeh Aflaki,&nbsp;Ahmad Hammoud,&nbsp;Zahra Taghizadeh,&nbsp;Mostafa Asgarinejad,&nbsp;Hamid Soltanian-Zadeh","doi":"10.3389/fnsys.2023.919977","DOIUrl":null,"url":null,"abstract":"<p><p>Predicting the therapeutic result of repetitive transcranial magnetic stimulation (rTMS) treatment could save time and costs as ineffective treatment can be avoided. To this end, we presented a machine-learning-based strategy for classifying patients with major depression disorder (MDD) into responders (R) and nonresponders (NR) to rTMS treatment. Resting state EEG data were recorded using 32 electrodes from 88 MDD patients before treatment. Then, patients underwent 7 weeks of rTMS, and 46 of them responded to treatment. By applying Independent Component Analysis (ICA) on EEG, we identified the relevant brain sources as possible indicators of neural activity in the dorsolateral prefrontal cortex (DLPFC). This was served through estimating the generators of activity in the sensor domain. Subsequently, we added physiological information and placed certain terms and conditions to offer a far more realistic estimation than the classic EEG. Ultimately, those components mapped in accordance with the region of the DLPFC in the sensor domain were chosen. Features extracted from the relevant ICs time series included permutation entropy (PE), fractal dimension (FD), Lempel-Ziv Complexity (LZC), power spectral density, correlation dimension (CD), features based on bispectrum, frontal and prefrontal cordance, and a combination of them. The most relevant features were selected by a Genetic Algorithm (GA). For classifying two groups of R and NR, K-Nearest Neighbor (KNN), Support Vector Machine (SVM), and Multilayer Perceptron (MLP) were applied to predict rTMS treatment response. To evaluate the performance of classifiers, a 10-fold cross-validation method was employed. A statistical test was used to assess the capability of features in differentiating R and NR for further research. EEG characteristics that can predict rTMS treatment response were discovered. The strongest discriminative indicators were EEG beta power, the sum of bispectrum diagonal elements in delta and beta bands, and CD. The Combined feature vector classified R and NR with a high performance of 94.31% accuracy, 92.85% specificity, 95.65% sensitivity, and 92.85% precision using SVM. This result indicates that our proposed method with power and nonlinear and bispectral features from relevant ICs time-series can predict the treatment outcome of rTMS for MDD patients only by one session pretreatment EEG recording. The obtained results show that the proposed method outperforms previous methods.</p>","PeriodicalId":12649,"journal":{"name":"Frontiers in Systems Neuroscience","volume":null,"pages":null},"PeriodicalIF":3.1000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10034109/pdf/","citationCount":"5","resultStr":"{\"title\":\"Machine learning approaches and non-linear processing of extracted components in frontal region to predict rTMS treatment response in major depressive disorder.\",\"authors\":\"Elias Ebrahimzadeh,&nbsp;Farahnaz Fayaz,&nbsp;Lila Rajabion,&nbsp;Masoud Seraji,&nbsp;Fatemeh Aflaki,&nbsp;Ahmad Hammoud,&nbsp;Zahra Taghizadeh,&nbsp;Mostafa Asgarinejad,&nbsp;Hamid Soltanian-Zadeh\",\"doi\":\"10.3389/fnsys.2023.919977\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Predicting the therapeutic result of repetitive transcranial magnetic stimulation (rTMS) treatment could save time and costs as ineffective treatment can be avoided. To this end, we presented a machine-learning-based strategy for classifying patients with major depression disorder (MDD) into responders (R) and nonresponders (NR) to rTMS treatment. Resting state EEG data were recorded using 32 electrodes from 88 MDD patients before treatment. Then, patients underwent 7 weeks of rTMS, and 46 of them responded to treatment. By applying Independent Component Analysis (ICA) on EEG, we identified the relevant brain sources as possible indicators of neural activity in the dorsolateral prefrontal cortex (DLPFC). This was served through estimating the generators of activity in the sensor domain. Subsequently, we added physiological information and placed certain terms and conditions to offer a far more realistic estimation than the classic EEG. Ultimately, those components mapped in accordance with the region of the DLPFC in the sensor domain were chosen. Features extracted from the relevant ICs time series included permutation entropy (PE), fractal dimension (FD), Lempel-Ziv Complexity (LZC), power spectral density, correlation dimension (CD), features based on bispectrum, frontal and prefrontal cordance, and a combination of them. The most relevant features were selected by a Genetic Algorithm (GA). For classifying two groups of R and NR, K-Nearest Neighbor (KNN), Support Vector Machine (SVM), and Multilayer Perceptron (MLP) were applied to predict rTMS treatment response. To evaluate the performance of classifiers, a 10-fold cross-validation method was employed. A statistical test was used to assess the capability of features in differentiating R and NR for further research. EEG characteristics that can predict rTMS treatment response were discovered. The strongest discriminative indicators were EEG beta power, the sum of bispectrum diagonal elements in delta and beta bands, and CD. The Combined feature vector classified R and NR with a high performance of 94.31% accuracy, 92.85% specificity, 95.65% sensitivity, and 92.85% precision using SVM. This result indicates that our proposed method with power and nonlinear and bispectral features from relevant ICs time-series can predict the treatment outcome of rTMS for MDD patients only by one session pretreatment EEG recording. The obtained results show that the proposed method outperforms previous methods.</p>\",\"PeriodicalId\":12649,\"journal\":{\"name\":\"Frontiers in Systems Neuroscience\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":3.1000,\"publicationDate\":\"2023-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10034109/pdf/\",\"citationCount\":\"5\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Frontiers in Systems Neuroscience\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.3389/fnsys.2023.919977\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"NEUROSCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Systems Neuroscience","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.3389/fnsys.2023.919977","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"NEUROSCIENCES","Score":null,"Total":0}
引用次数: 5

摘要

预测重复经颅磁刺激(rTMS)治疗的效果可以避免无效治疗,节省时间和成本。为此,我们提出了一种基于机器学习的策略,将重度抑郁症(MDD)患者分为对rTMS治疗有反应(R)和无反应(NR)。88例重度抑郁症患者在治疗前使用32个电极记录静息状态脑电图数据。然后,患者接受了7周的rTMS治疗,其中46人对治疗有反应。通过对脑电图进行独立分量分析(ICA),我们确定了相关的脑源作为背外侧前额叶皮层(DLPFC)神经活动的可能指标。这是通过估计传感器域的活动发生器来实现的。随后,我们添加了生理信息,并设置了某些条款和条件,以提供比经典脑电图更真实的估计。最终选择与DLPFC在传感器域中的区域相匹配的分量。从相关ic时间序列中提取的特征包括排列熵(PE)、分形维数(FD)、Lempel-Ziv复杂度(LZC)、功率谱密度(功率谱密度)、相关维数(CD)、基于双谱的特征、额叶和前额叶的一致性以及它们的组合。通过遗传算法(GA)选择最相关的特征。为了对R和NR两组进行分类,应用k -最近邻(KNN)、支持向量机(SVM)和多层感知器(MLP)预测rTMS治疗反应。为了评估分类器的性能,采用了10倍交叉验证方法。采用统计检验评估特征区分R和NR的能力,以供进一步研究。发现了可以预测rTMS治疗反应的脑电图特征。最强判别指标为EEG beta功率、delta和beta波段双谱对角线元素和CD。结合SVM对R和NR进行分类,准确率为94.31%,特异度为92.85%,灵敏度为95.65%,精密度为92.85%。该结果表明,我们提出的方法利用相关ic时间序列的功率和非线性双谱特征,仅通过一次预处理脑电记录即可预测重度抑郁症患者的rTMS治疗结果。实验结果表明,该方法优于以往的方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Machine learning approaches and non-linear processing of extracted components in frontal region to predict rTMS treatment response in major depressive disorder.

Machine learning approaches and non-linear processing of extracted components in frontal region to predict rTMS treatment response in major depressive disorder.

Machine learning approaches and non-linear processing of extracted components in frontal region to predict rTMS treatment response in major depressive disorder.

Machine learning approaches and non-linear processing of extracted components in frontal region to predict rTMS treatment response in major depressive disorder.

Predicting the therapeutic result of repetitive transcranial magnetic stimulation (rTMS) treatment could save time and costs as ineffective treatment can be avoided. To this end, we presented a machine-learning-based strategy for classifying patients with major depression disorder (MDD) into responders (R) and nonresponders (NR) to rTMS treatment. Resting state EEG data were recorded using 32 electrodes from 88 MDD patients before treatment. Then, patients underwent 7 weeks of rTMS, and 46 of them responded to treatment. By applying Independent Component Analysis (ICA) on EEG, we identified the relevant brain sources as possible indicators of neural activity in the dorsolateral prefrontal cortex (DLPFC). This was served through estimating the generators of activity in the sensor domain. Subsequently, we added physiological information and placed certain terms and conditions to offer a far more realistic estimation than the classic EEG. Ultimately, those components mapped in accordance with the region of the DLPFC in the sensor domain were chosen. Features extracted from the relevant ICs time series included permutation entropy (PE), fractal dimension (FD), Lempel-Ziv Complexity (LZC), power spectral density, correlation dimension (CD), features based on bispectrum, frontal and prefrontal cordance, and a combination of them. The most relevant features were selected by a Genetic Algorithm (GA). For classifying two groups of R and NR, K-Nearest Neighbor (KNN), Support Vector Machine (SVM), and Multilayer Perceptron (MLP) were applied to predict rTMS treatment response. To evaluate the performance of classifiers, a 10-fold cross-validation method was employed. A statistical test was used to assess the capability of features in differentiating R and NR for further research. EEG characteristics that can predict rTMS treatment response were discovered. The strongest discriminative indicators were EEG beta power, the sum of bispectrum diagonal elements in delta and beta bands, and CD. The Combined feature vector classified R and NR with a high performance of 94.31% accuracy, 92.85% specificity, 95.65% sensitivity, and 92.85% precision using SVM. This result indicates that our proposed method with power and nonlinear and bispectral features from relevant ICs time-series can predict the treatment outcome of rTMS for MDD patients only by one session pretreatment EEG recording. The obtained results show that the proposed method outperforms previous methods.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Frontiers in Systems Neuroscience
Frontiers in Systems Neuroscience Neuroscience-Developmental Neuroscience
CiteScore
6.00
自引率
3.30%
发文量
144
审稿时长
14 weeks
期刊介绍: Frontiers in Systems Neuroscience publishes rigorously peer-reviewed research that advances our understanding of whole systems of the brain, including those involved in sensation, movement, learning and memory, attention, reward, decision-making, reasoning, executive functions, and emotions.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信