从太平洋深海热液沉积物中分离的海洋产胞外多糖的蜡样芽孢杆菌2-6A的全基因组序列

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Xuan Zou, Chuan-Lei Suo, Xiao-Mei Geng, Chun-Yang Li, Hui-Hui Fu, Yi Zhang, Peng Wang, Mei-Ling Sun
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引用次数: 0

摘要

蜡状芽孢杆菌2-6A是从太平洋2628m深的热液区沉积物中分离得到的。在本研究中,我们报道了菌株2-6A的全基因组序列,并对其进行了分析,以了解其代谢能力和天然产物的生物合成潜力。菌株2-6A的基因组由一个5191018bp的环状染色体和两个分别为234719bp和411441bp的质粒组成,GC含量为35.3mol%。基因组数据挖掘表明,菌株2-6A具有几个参与胞外多糖(EPSs)和聚羟基烷酸酯(PHAs)生产和复杂多糖降解的基因簇。它还具有多种基因,使菌株2-6A能够应对渗透胁迫、氧化胁迫、热休克、冷休克和重金属胁迫,这对菌株对水热环境的适应性起着至关重要的作用。还预测了次级代谢产物产生的基因簇,如套索肽和铁载体。因此,基因组测序和数据挖掘为芽孢杆菌适应深海热液环境的分子机制提供了见解,并有助于进一步的实验探索。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Complete genome sequence of Bacillus cereus 2-6A, a marine exopolysaccharide-producing bacterium isolated from deep-sea hydrothermal sediment of the Pacific Ocean

Bacillus cereus 2-6A, was isolated from the sediments in the hydrothermal area of the Pacific Ocean with a water depth of 2628 m. In this study, we report the whole genome sequence of strain 2-6A and analyze that to understand its metabolic capacities and biosynthesis potential of natural products. The genome of strain 2-6A consists of a circular chromosome of 5,191,018 bp with a GC content of 35.3 mol% and two plasmids of 234,719 bp and 411,441 bp, respectively. Genomic data mining reveals that strain 2-6A has several gene clusters involved in exopolysaccharides (EPSs) and polyhydroxyalkanoates (PHAs) production and complex polysaccharides degradation. It also possesses a variety of genes for allowing strain 2-6A to cope with osmotic stress, oxidative stress, heat shock, cold shock and heavy metal stress, which could play a vital role in the adaptability of the strain to hydrothermal environments. Gene clusters for secondary metabolite production, such as lasso peptide and siderophore, are also predicted. Therefore, genome sequencing and data mining provide insights into the molecular mechanisms of Bacillus in adapting to hydrothermal deep ocean environments and can facilitate further experimental exploration.

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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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