Megan F Taylor, Michael A Black, Mark B Hampton, Elizabeth C Ledgerwood
{"title":"通过基因表达分析了解h2o2诱导Jurkat细胞信号转导。","authors":"Megan F Taylor, Michael A Black, Mark B Hampton, Elizabeth C Ledgerwood","doi":"10.1080/10715762.2023.2165073","DOIUrl":null,"url":null,"abstract":"<p><p>Hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>) is a ubiquitous oxidant produced in a regulated manner by various enzymes in mammalian cells. H<sub>2</sub>O<sub>2</sub> reversibly oxidizes thiol groups of cysteine residues to mediate intracellular signaling. While examples of H<sub>2</sub>O<sub>2-</sub>dependent signaling have been reported, the exact molecular mechanism(s) of signaling and the pathways affected are not well understood. Here, the transcriptomic response of Jurkat T cells to H<sub>2</sub>O<sub>2</sub> was investigated to determine global effects on gene expression. With a low H<sub>2</sub>O<sub>2</sub> concentration (10 µM) that did not induce an oxidative stress response or cell death, extensive changes in gene expression occurred after 4 h (6803 differentially expressed genes). Of the genes with a greater then 2-fold change in expression, 85% were upregulated suggesting that in a physiological setting H<sub>2</sub>O<sub>2</sub> predominantly activates gene expression. Pathway analysis identified gene expression signatures associated with FOXO and NTRK signaling. These signatures were associated with an overlapping set of transcriptional regulators. Overall, our results provide a snapshot of gene expression changes in response to H<sub>2</sub>O<sub>2,</sub> which, along with further studies, will lead to new insights into the specific pathways that are activated in response to endogenous production of H<sub>2</sub>O<sub>2</sub>, and the molecular mechanisms of H<sub>2</sub>O<sub>2</sub> signaling.</p>","PeriodicalId":12411,"journal":{"name":"Free Radical Research","volume":null,"pages":null},"PeriodicalIF":3.6000,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Insights into H<sub>2</sub>O<sub>2</sub>-induced signaling in Jurkat cells from analysis of gene expression.\",\"authors\":\"Megan F Taylor, Michael A Black, Mark B Hampton, Elizabeth C Ledgerwood\",\"doi\":\"10.1080/10715762.2023.2165073\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>) is a ubiquitous oxidant produced in a regulated manner by various enzymes in mammalian cells. H<sub>2</sub>O<sub>2</sub> reversibly oxidizes thiol groups of cysteine residues to mediate intracellular signaling. While examples of H<sub>2</sub>O<sub>2-</sub>dependent signaling have been reported, the exact molecular mechanism(s) of signaling and the pathways affected are not well understood. Here, the transcriptomic response of Jurkat T cells to H<sub>2</sub>O<sub>2</sub> was investigated to determine global effects on gene expression. With a low H<sub>2</sub>O<sub>2</sub> concentration (10 µM) that did not induce an oxidative stress response or cell death, extensive changes in gene expression occurred after 4 h (6803 differentially expressed genes). Of the genes with a greater then 2-fold change in expression, 85% were upregulated suggesting that in a physiological setting H<sub>2</sub>O<sub>2</sub> predominantly activates gene expression. Pathway analysis identified gene expression signatures associated with FOXO and NTRK signaling. These signatures were associated with an overlapping set of transcriptional regulators. Overall, our results provide a snapshot of gene expression changes in response to H<sub>2</sub>O<sub>2,</sub> which, along with further studies, will lead to new insights into the specific pathways that are activated in response to endogenous production of H<sub>2</sub>O<sub>2</sub>, and the molecular mechanisms of H<sub>2</sub>O<sub>2</sub> signaling.</p>\",\"PeriodicalId\":12411,\"journal\":{\"name\":\"Free Radical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":3.6000,\"publicationDate\":\"2022-09-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Free Radical Research\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/10715762.2023.2165073\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Free Radical Research","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/10715762.2023.2165073","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Insights into H2O2-induced signaling in Jurkat cells from analysis of gene expression.
Hydrogen peroxide (H2O2) is a ubiquitous oxidant produced in a regulated manner by various enzymes in mammalian cells. H2O2 reversibly oxidizes thiol groups of cysteine residues to mediate intracellular signaling. While examples of H2O2-dependent signaling have been reported, the exact molecular mechanism(s) of signaling and the pathways affected are not well understood. Here, the transcriptomic response of Jurkat T cells to H2O2 was investigated to determine global effects on gene expression. With a low H2O2 concentration (10 µM) that did not induce an oxidative stress response or cell death, extensive changes in gene expression occurred after 4 h (6803 differentially expressed genes). Of the genes with a greater then 2-fold change in expression, 85% were upregulated suggesting that in a physiological setting H2O2 predominantly activates gene expression. Pathway analysis identified gene expression signatures associated with FOXO and NTRK signaling. These signatures were associated with an overlapping set of transcriptional regulators. Overall, our results provide a snapshot of gene expression changes in response to H2O2, which, along with further studies, will lead to new insights into the specific pathways that are activated in response to endogenous production of H2O2, and the molecular mechanisms of H2O2 signaling.
期刊介绍:
Free Radical Research publishes high-quality research papers, hypotheses and reviews in free radicals and other reactive species in biological, clinical, environmental and other systems; redox signalling; antioxidants, including diet-derived antioxidants and other relevant aspects of human nutrition; and oxidative damage, mechanisms and measurement.