血蛤(Tegillarca granosa)对长时间间歇性缺氧的转录组和生化反应。

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Haoxiang Cheng , Zhilan Peng , Chenxi Zhao , Hongyu Jin , Yongbo Bao , Minhai Liu
{"title":"血蛤(Tegillarca granosa)对长时间间歇性缺氧的转录组和生化反应。","authors":"Haoxiang Cheng ,&nbsp;Zhilan Peng ,&nbsp;Chenxi Zhao ,&nbsp;Hongyu Jin ,&nbsp;Yongbo Bao ,&nbsp;Minhai Liu","doi":"10.1016/j.cbpb.2023.110923","DOIUrl":null,"url":null,"abstract":"<div><p>The blood clam (<em>Tegillarca granosa</em><span><span>), a marine bivalve of ecological and economic significance, often encounters intermittent hypoxia in mudflats and aquatic environments. To study the response of blood clam foot to prolonged intermittent hypoxia, the clams were exposed to intermittent hypoxia conditions (0.5 mg/L dissolved oxygen, with a 12-h interval) for 31 days. Initially, transcriptomic analysis was performed, uncovering a total of 698 differentially expressed genes (DEGs), with 236 upregulated and 462 downregulated. These genes show enrichments in </span>signaling pathways<span><span> related to glucose metabolism, sugar synthesis and responses to </span>oxidative stress<span>. Furthermore, the activity of the enzyme<span> glutathione peroxidase (GPx) and the levels of </span></span></span></span><em>gpx1</em> mRNA showed gradual increases, reaching their peak on the 13th day of intermittent hypoxia exposure. This observation suggests an indirect protective role of GPx against oxidative stress. The results of this study make a significantly contribute to our broader comprehensive of the physiological, biochemical responses, and molecular reactions governing the organization of foot muscle tissue in marine bivalves exposed to prolonged intermittent hypoxic conditions.</p></div>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2023-11-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"The transcriptomic and biochemical responses of blood clams (Tegillarca granosa) to prolonged intermittent hypoxia\",\"authors\":\"Haoxiang Cheng ,&nbsp;Zhilan Peng ,&nbsp;Chenxi Zhao ,&nbsp;Hongyu Jin ,&nbsp;Yongbo Bao ,&nbsp;Minhai Liu\",\"doi\":\"10.1016/j.cbpb.2023.110923\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The blood clam (<em>Tegillarca granosa</em><span><span>), a marine bivalve of ecological and economic significance, often encounters intermittent hypoxia in mudflats and aquatic environments. To study the response of blood clam foot to prolonged intermittent hypoxia, the clams were exposed to intermittent hypoxia conditions (0.5 mg/L dissolved oxygen, with a 12-h interval) for 31 days. Initially, transcriptomic analysis was performed, uncovering a total of 698 differentially expressed genes (DEGs), with 236 upregulated and 462 downregulated. These genes show enrichments in </span>signaling pathways<span><span> related to glucose metabolism, sugar synthesis and responses to </span>oxidative stress<span>. Furthermore, the activity of the enzyme<span> glutathione peroxidase (GPx) and the levels of </span></span></span></span><em>gpx1</em> mRNA showed gradual increases, reaching their peak on the 13th day of intermittent hypoxia exposure. This observation suggests an indirect protective role of GPx against oxidative stress. The results of this study make a significantly contribute to our broader comprehensive of the physiological, biochemical responses, and molecular reactions governing the organization of foot muscle tissue in marine bivalves exposed to prolonged intermittent hypoxic conditions.</p></div>\",\"PeriodicalId\":1,\"journal\":{\"name\":\"Accounts of Chemical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":16.4000,\"publicationDate\":\"2023-11-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Accounts of Chemical Research\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1096495923000982\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1096495923000982","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

摘要

血蛤(Tegillarca granosa)是一种具有生态和经济意义的海洋双壳类动物,在泥滩和水生环境中经常遇到间歇性缺氧。为了研究血蛤足对长时间间歇缺氧的反应,将蛤暴露在间歇缺氧条件下(0.5 mg/L溶解氧,间隔12 h) 31 天。首先进行转录组学分析,共发现698个差异表达基因(deg),其中236个上调,462个下调。这些基因在与葡萄糖代谢、糖合成和氧化应激反应相关的信号通路中表现出富集。谷胱甘肽过氧化物酶(GPx)活性和gpx1 mRNA水平逐渐升高,在间歇性缺氧暴露第13天达到峰值。这一观察结果表明GPx对氧化应激具有间接保护作用。本研究的结果对我们更广泛地了解暴露于长时间间歇性缺氧条件下的海洋双壳类足部肌肉组织的生理、生化反应和分子反应做出了重大贡献。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

The transcriptomic and biochemical responses of blood clams (Tegillarca granosa) to prolonged intermittent hypoxia

The transcriptomic and biochemical responses of blood clams (Tegillarca granosa) to prolonged intermittent hypoxia

The blood clam (Tegillarca granosa), a marine bivalve of ecological and economic significance, often encounters intermittent hypoxia in mudflats and aquatic environments. To study the response of blood clam foot to prolonged intermittent hypoxia, the clams were exposed to intermittent hypoxia conditions (0.5 mg/L dissolved oxygen, with a 12-h interval) for 31 days. Initially, transcriptomic analysis was performed, uncovering a total of 698 differentially expressed genes (DEGs), with 236 upregulated and 462 downregulated. These genes show enrichments in signaling pathways related to glucose metabolism, sugar synthesis and responses to oxidative stress. Furthermore, the activity of the enzyme glutathione peroxidase (GPx) and the levels of gpx1 mRNA showed gradual increases, reaching their peak on the 13th day of intermittent hypoxia exposure. This observation suggests an indirect protective role of GPx against oxidative stress. The results of this study make a significantly contribute to our broader comprehensive of the physiological, biochemical responses, and molecular reactions governing the organization of foot muscle tissue in marine bivalves exposed to prolonged intermittent hypoxic conditions.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信