Nikita S. Kulishkin , Alexey V. Smirnov , David J. Patterson
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引用次数: 0
摘要
Leptomyxa属的变形虫具有可变的形态,只能使用分子数据可靠地识别。然而,由于形态不同的物种之间的序列差异非常低,因此基于18S rRNA基因序列进行物种区分是困难的。其他基因的数据库要小得多,Leptomyxa的基因组数据几乎没有。本文描述了从俄罗斯西北部分离到的Leptomyxa属两个陆生新种,Leptomyxa botanica n. sp.和Leptomyxa monrepos n. sp.。这两个物种的核仁物质结构复杂,易于形成扩大的扇形结构。系统发育分析表明这两个物种具有派生的地位。它们与valladaresi形成一个分支。我们的树证实了Leptomyxa物种的18S rRNA基因序列分为两个大分支。这些分支的形态学突触不明显。由于缺乏对许多测序菌株的可靠形态学数据和可能对某些分离株的错误鉴定,这种分析变得复杂。
Two new species of the genus Leptomyxa (Goodey, 1915) – Leptomyxa botanica n. sp. and Leptomyxa monrepos n. sp. from the soil habitats of Northwestern Russia
Amoebae of the genus Leptomyxa have variable morphologies and can only be reliably identified using molecular data. However, species distinction based on the 18S rRNA gene sequence is difficult due to the very low level of sequence divergence among morphologically different species. The database for other genes is much smaller, and genomic data on Leptomyxa is almost absent. In this study, we describe two new terrestrial species of the genus Leptomyxa isolated from Northwestern Russia, Leptomyxa botanica n. sp. and Leptomyxa monrepos n. sp. Both species easily adopt an expanded fan-shaped form and have a complex structure of the nucleolar material. Phylogenetic analyses show a derived status of these two species. They form a clade with Leptomyxa valladaresi. Our tree confirms that the 18S rRNA gene sequences of Leptomyxa species are split into two large clades. The morphological synapomorphies of these clades are not obvious. This analysis is complicated by the lack of reliable morphological data on many sequenced strains and probable misidentification of some isolates.
期刊介绍:
Articles deal with protists, unicellular organisms encountered free-living in various habitats or as parasites or used in basic research or applications. The European Journal of Protistology covers topics such as the structure and systematics of protists, their development, ecology, molecular biology and physiology. Beside publishing original articles the journal offers a forum for announcing scientific meetings. Reviews of recently published books are included as well. With its diversity of topics, the European Journal of Protistology is an essential source of information for every active protistologist and for biologists of various fields.