磷酸化蛋白质组鉴定和表征的富集策略

IF 0.4 Q4 SPECTROSCOPY
Sun-Young Lee, Dukjin Kang, Jongki Hong
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引用次数: 0

摘要

众所周知,蛋白质磷酸化是一个关键的调节因子,涉及调节许多细胞过程如生长、迁移和分化。到目前为止,将多维分离技术嫁接到先进的质谱(MS)上已经成为研究细胞磷酸化生物学功能的一种很有前途的工具。然而,由于其固有的问题,即低化学计量学,在正离子模式下的敏感性较低,以及生物样品中的丰度较低,先进的MS-based磷酸化蛋白质组学仍然具有挑战性。为了克服这些瓶颈,各种技术(如SCX、HILIC、ERLIC、IMAC、TiO2等)不断被开发出来,用于从生物样品中在线/离线富集磷酸化蛋白(或肽),从而有助于定性/定量测定磷酸化蛋白及其磷酸化位点。在本文中,我们介绍了富集工具的总体观点,这些富集工具普遍用于在基于质谱的磷酸化蛋白组学分析之前,从普通磷酸化蛋白(或肽)中选择性地分离出晚期靶向磷酸化蛋白(或肽)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Enrichment Strategies for Identification and Characterization of Phosphoproteome
Phosphorylation upon protein is well known to a key regulator that implicates in modulating many cellular processes like growth, migration, and differentiation. Up to date, grafting of multidimensional separation techniques onto advanced mass spectrometry (MS) has emerged as a promising tool for figuring out the biological functions of phosphorylation in a cell. How- ever, advanced MS-based phosphoproteomics is still challenging, due to its intrinsic issues, i.e., low stoichiometry, less suscepti- bility in positive ion mode, and low abundance in biological sample. To overcome these bottlenecks, diverse techniques (e.g., SCX, HILIC, ERLIC, IMAC, TiO2, etc.) are continuously developed for on-/off-line enrichment of phosphorylated protein (or peptide) from biological samples, thereby helping qualitative/quantitative determination of phosphorylated protein and its phos- phorylated sites. In this review, we introduce to the overall views of enrichment tools that are universally used to selectively iso- late targeted phosphorylated protein (or peptide) from ordinary ones before MS-based phospoproteomic analysis.
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来源期刊
CiteScore
0.90
自引率
20.00%
发文量
0
审稿时长
6 weeks
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