{"title":"基于高通量测序(high-throughput sequencing, HTS)的湖泊水体和沉积物中无脊椎动物卵的多样性比较","authors":"Xiaoyang Wang, Qing Wang, Yufeng Yang, Wenbo Yu","doi":"10.1051/kmae/2020011","DOIUrl":null,"url":null,"abstract":"Aquatic invertebrate diversity reflects water quality and the health of aquatic ecosystems and should be monitored as an essential feature of freshwater ecosystems. The resting eggs of aquatic invertebrates in sediments populate the overlying water. The diversity of invertebrates in waters and their resting eggs in sediments in Baiyangdian Lake, Xiongan, North China, were assessed using high-throughput sequencing (HTS) with a pair of 18S rRNA gene adaptor-linked primers. The total of 99 operational taxonomic units (OTUs) derived from 353,755 invertebrate sequences (mostly zooplankton) were revealed by this study. A total of 50 species in the water samples including 20 rotifers, 11 copepods, 1 cladoceran and 18 other species were sorted out. In the sediment 37 species, including 21 rotifers, 3 copepods, 1 cladoceran and 12 other species, were identified. There were 24 species in common between water and corresponding sediments. Invertebrate OTU richness in water samples was higher than that in sediments (p < 0.01), while there was no significant difference in the Shannon-Wiener index. These results suggest that HTS is a promising alternative for efficient biodiversity assessment and monitoring.","PeriodicalId":54748,"journal":{"name":"Knowledge and Management of Aquatic Ecosystems","volume":"49 1","pages":""},"PeriodicalIF":1.6000,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"5","resultStr":"{\"title\":\"Comparison of invertebrate diversity in lake waters and their resting eggs in sediments, as revealed by high-throughput sequencing (HTS)\",\"authors\":\"Xiaoyang Wang, Qing Wang, Yufeng Yang, Wenbo Yu\",\"doi\":\"10.1051/kmae/2020011\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Aquatic invertebrate diversity reflects water quality and the health of aquatic ecosystems and should be monitored as an essential feature of freshwater ecosystems. The resting eggs of aquatic invertebrates in sediments populate the overlying water. The diversity of invertebrates in waters and their resting eggs in sediments in Baiyangdian Lake, Xiongan, North China, were assessed using high-throughput sequencing (HTS) with a pair of 18S rRNA gene adaptor-linked primers. The total of 99 operational taxonomic units (OTUs) derived from 353,755 invertebrate sequences (mostly zooplankton) were revealed by this study. A total of 50 species in the water samples including 20 rotifers, 11 copepods, 1 cladoceran and 18 other species were sorted out. In the sediment 37 species, including 21 rotifers, 3 copepods, 1 cladoceran and 12 other species, were identified. There were 24 species in common between water and corresponding sediments. Invertebrate OTU richness in water samples was higher than that in sediments (p < 0.01), while there was no significant difference in the Shannon-Wiener index. These results suggest that HTS is a promising alternative for efficient biodiversity assessment and monitoring.\",\"PeriodicalId\":54748,\"journal\":{\"name\":\"Knowledge and Management of Aquatic Ecosystems\",\"volume\":\"49 1\",\"pages\":\"\"},\"PeriodicalIF\":1.6000,\"publicationDate\":\"2020-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"5\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Knowledge and Management of Aquatic Ecosystems\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://doi.org/10.1051/kmae/2020011\",\"RegionNum\":3,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"FISHERIES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Knowledge and Management of Aquatic Ecosystems","FirstCategoryId":"93","ListUrlMain":"https://doi.org/10.1051/kmae/2020011","RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"FISHERIES","Score":null,"Total":0}
Comparison of invertebrate diversity in lake waters and their resting eggs in sediments, as revealed by high-throughput sequencing (HTS)
Aquatic invertebrate diversity reflects water quality and the health of aquatic ecosystems and should be monitored as an essential feature of freshwater ecosystems. The resting eggs of aquatic invertebrates in sediments populate the overlying water. The diversity of invertebrates in waters and their resting eggs in sediments in Baiyangdian Lake, Xiongan, North China, were assessed using high-throughput sequencing (HTS) with a pair of 18S rRNA gene adaptor-linked primers. The total of 99 operational taxonomic units (OTUs) derived from 353,755 invertebrate sequences (mostly zooplankton) were revealed by this study. A total of 50 species in the water samples including 20 rotifers, 11 copepods, 1 cladoceran and 18 other species were sorted out. In the sediment 37 species, including 21 rotifers, 3 copepods, 1 cladoceran and 12 other species, were identified. There were 24 species in common between water and corresponding sediments. Invertebrate OTU richness in water samples was higher than that in sediments (p < 0.01), while there was no significant difference in the Shannon-Wiener index. These results suggest that HTS is a promising alternative for efficient biodiversity assessment and monitoring.
期刊介绍:
Knowledge and Management of Aquatic Ecosystems (KMAE-Bulletin Français de la Pêche et de la Pisciculture since 1928) serves as a foundation for scientific advice across the broad spectrum of management and conservation issues related to freshwater ecosystems.
The journal publishes articles, short communications, reviews, comments and replies that contribute to a scientific understanding of freshwater ecosystems and the impact of human activities upon these systems. Its scope includes economic, social, and public administration studies, in so far as they are directly concerned with the management of freshwater ecosystems (e.g. European Water Framework Directive, USA Clean Water Act, Canadian Water Quality Guidelines, …) and prove of general interest to freshwater specialists. Papers on insular freshwater ecosystems and on transitional waters are welcome. KMAE is not a preferred journal for taxonomical, physiological, biological, toxicological studies, unless a clear link to ecological aspects can be established. Articles with a very descriptive content can be accepted if they are part of a broader ecological context.