Proteogest: a tool for facilitating proteomics using mass spectrometry

In a typical proteomic experiment, mass spectrometry (MS) is coupled to protein or peptide separation steps for the identification of many hundreds to thousands of peptides. With the continuing advances in instrumentation and data generation, effective software is needed to link the different stages of proteomic analysis. Proteogest has been developed to carry out descriptive and statistical analyses of the biophysical properties of thousands of protein sequences and to perform in silico proteolytic digestions of proteomes coupled to subsequent sequence analysis.