镰刀病和几丁质酶抗性基因/位点的新snp鉴定

A. Nalbandyan, T. S. Rudenko, A. S. Fomina
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引用次数: 0

摘要

本研究的目的是通过检测特异性引物FusA1F/R、2Ch300F/R和7Ch310F/R,研究胁迫条件下酸性几丁质酶表达的SE2基因和甜菜根育种材料对枯萎病抗性的基因位点。研究材料为国内外选择的甜菜根植物。为了确定控制酸性几丁质酶稳定水平的SE2基因(位于3号染色体上)与甜菜根腐病抗性之间的联系,利用分子遗传标记FusA1对10份甜菜根进行了分型。除野生甜菜根植物(Beta corolliflora Zoss.)外,在所有基因型中均鉴定出两个600 b.p.和400 b.p.的DNA片段。通过对SE2基因的研究,与抗性基因型相比,香农外源杂杂种鉴定出8个单核苷酸替换(3个T/C、2个C/G、a /G、G/ a、C/T)和3个单核苷酸插入(核苷酸a)。编码保护蛋白的位点(位于第2和第7染色体区域)与抗枯萎病的形成有关,在国内育种材料和国外杂交种中也发现了snp。使用genous Prime工具对测序序列进行分析和比对。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
IDENTIFICATION OF NEW SNPS IN GENES/LOCI OF RESISTANCE TO FUSARIOSIS AND CHITINASE
The aim of this work is to test specific primers FusA1F/R, 2Ch300F/R, and 7Ch310F/R to study SE2 gene responsible for expression of acid chitinase in stressful situations, and loci that ensure resistance of sugar beetroot breeding material to Fusarium rot. Material for the study was sugar beetroot plants of domestic and foreign selection. To confirm the connection of SE2 gene (localized on chromosome 3)which controlsstable level of acid chitinase with resistance of sugar beetroot to root rot, ten samples of sugar beetroot were typed using molecular genetic marker FusA1. Two 600 b.p. and 400 b.p. DNA fragments in all studied genotypes, except wild beetroot plants (Beta corolliflora Zoss.)were identified. As a result of the studies of SE2 gene, eight single nucleotide substitutions (3 T/C, 2 C/G, A/G, G/A, C/T) and three single nucleotide insertions (nucleotide A) were identified in plants of Shannon foreign hybrid compared to the resistant genotype. As for loci encoding protective proteins (regions of the second and seventh chromosomes) and involved in formation of resistance to Fusarium rot, SNPs were also found in domestic breeding materials and foreign hybrids. The Geneious Prime tool was used to analyze and align the sequenced sequences.
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