冠状病毒(covid - 19)基因组:基因组和生化分析显示其可能的合成来源

T. Mohanta
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引用次数: 3

摘要

严重急性呼吸综合征(SARS)冠状病毒2型(SARS - cov -2)介导的疫情是一场全球性大流行。它已经演变成人类文明的诅咒,在目前的情况下,世界上大多数城市都处于封锁状态。SARS-CoV-2 (covid - 19)的第一个基因组序列数据及其随后的报告得出结论,该病毒是冠状病毒属的成员,并具有蝙蝠宿主。为了了解其起源和进化,我们通过比较蝙蝠SARS冠状病毒与其他SARS冠状病毒(包括德国分离的人类SARS冠状病毒)的基因组进行了深入的比较研究。结果表明,中国、印度、意大利、尼泊尔和美国分离株的covid - 19基因组仅与蝙蝠SARS冠状病毒序列相似性为79 ~ 80%,与德国分离株的人类SARS冠状病毒序列相似性约为60%。而这些国家的新冠病毒基因组序列相似性为99-100%。如果SARS冠状病毒是通过蝙蝠源的SARS冠状病毒感染人类的,那么其序列相似性应该在99%以上,而本病例没有这种相似性。系统发育分析显示,蝙蝠SARS冠状病毒不属于中国、印度、意大利、尼泊尔和美国分离的SARS冠状病毒群。基因组分析显示存在多个微卫星重复序列。蛋白质组学分析显示,表面糖蛋白的融化温度(Tm)低于55℃,表明蒸汽处理是一种理想的预防措施,可以破坏covid - 19的稳定,从而使其传播
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Corona virus (CoVid19) genome: genomic and biochemical analysis revealed its possible synthetic origin
The Severe acute respiratory syndrome (SARS) corona virus 2 SARS-CoV-2 mediated epidemic is a global pandemic. It has evolved as a curse to the human civilization and at the present situation, where most of the cities in the world are on lockdown. The first genome sequence data of SARS-CoV-2 (CoVid19) and their reports that followed concluded that it was a member of the genus Betacoronavirus and has a bat reservoir. To understand its origin and evolution, we conducted a deep comparative study by comparing the genomes of bat SARS CoV and other SARS CoVs (including human SARS CoV of German isolate). Results revealed that CoVid19 genomes from isolates of China, India, Italy, Nepal, and the United States of America has sequence similarity of 79-80% only with the bat SARS CoV and it has sequence similarity of approximately 60% with the human SARS CoV of German isolate. Whereas, the sequence similarity within the CoVid19 genomes of these countries was 99-100%. If the SARS CoV infection happened to human through the SARS CoV of bat origin, it should have sequence similarity of more than 99% which was absent in this case. Phylogenetic analysis revealed, bat SARS CoV did not fall with the group of SARS CoV of China, India, Italy, Nepal, and USA isolates. The genome analysis revealed the presence of multiple microsatellite repeats sequences. Proteome analysis revealed, the melting temperature (Tm) of surface glycoprotein was less than 55oC, suggesting the steam treatment can be an ideal preventative measure to destabilize the CoVid19, and thus it’s spreading
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