J. E. Wenah-Emmanuel, E. Eze, E. O. Nwachuku, E. Wenah, Z. Jeremiah
{"title":"基于ABO/恒河猴血型分布的尼日利亚河州人血小板异体抗原基因频率评估","authors":"J. E. Wenah-Emmanuel, E. Eze, E. O. Nwachuku, E. Wenah, Z. Jeremiah","doi":"10.9734/IBRR/2021/V12I330152","DOIUrl":null,"url":null,"abstract":"Aim: The aim of this study was to assess the Gene Frequencies of Human Platelet Alloantigens in Rivers-State, Nigeria based on ABO/Rhesus blood groups distribution Study Design: A randomized controlled trial. Place and Duration of Study: Rivers State University Medical Centre, Port Harcourt, Safety Molecular Pathology Laboratory, Enugu State, Justcare clinical laboratory Port Harcourt Rivers State and University of Port Harcourt Teaching Hospital, between October 2019 and March 2020. Methodology: The subjects consisted of apparently healthy individuals who were of Rivers State origin totaling 104 persons aged 17 to 42 years. They were under-graduate and post graduate students of Rivers State University of Port Harcourt. Five major ethnic groups were considered which included Ikwerre, Ogoni, Ijaw, Etche and Ogba. Their demographic information was collected using a sample register and a questionnaire. Samples were collected from the antecubital vein. 10ml of blood was collected, 5ml was transferred into EDTA sample bottle (Ethylene diamine tetracetic acid) while 2ml was dispensed into plain bottle and labeled accordingly. Serological testing Original Research Article Wenah-Emmanuel et al.; IBRR, 12(3): 23-31, 2021; Article no.IBRR.68552 24 including HIV (RVS) screening, HBsag, HCV and VDRL were all as part of the inclusion criteria immediately after samples were collected. The remaining sample was analyzed using genotyping of Human Platelet Antigens by High Resolution Melting Curve Analysis Polymerase Chain Reaction (HRM-PCR), while tile method also known as forward/cell grouping method which is based on haem-agglutination reaction was used for ABO/Rh blood grouping. The melt curve analysis was done using the MicPCR software while the frequency analysis was done using Number Cruncher Statistical Software (NCSS) Version 13. GraphPad Prism Version 8.0.2 was used to determine the statistical significance between the various HPA genotypes and the ethnic groups and p-values of < 0.05 were considered to be statistically significant. Results were presented in percentages, mean+/standard deviation and in tables Results: The results showed that the A blood group had highest frequencies of 19.2% and 17.7% for HPA-5 b/b and HPA-4 a/a, while the least was 0.8% each for HPA-3 a/a, HPA-4 b/b and HPA-5. For blood group B, the highest were 20.0% (HPA-5 b/b) and 16.7% (HPA-3 b/b), and the least were 5.0% each for HPA-1 b/b and HPA-4 a/b, while blood group B had highest frequencies for HPA-1 a/a, HPA-2 b/b, HPA-3 b/b, HPA-4 a/b and HPA-5 b/b (20.0% each). The blood group O + HPA gene patterns had their highest values at 19.7% (HPA-5 b/b), 16.5% (HPA-4 a/a) and 13.7% (HPA-3 b/b) and the least was 7.9% (HPA-1 a/b), while for the blood group O , the highest was observed for HPA-3 b/b and HPA-5 b/b (20.0% each) and the least for HPA-1 a/a and a/b, HPA-2 a/b and b/b, and HPA-4 a/b and b/b (10.0% each). Conclusion: Based on the results, we conclude that A blood group had highest HPA frequencies. Whilst, the highest for blood group B were (HPA-5 b/b) and (HPA-3 b/b), and blood group B had highest frequencies for HPA-1 a/a, HPA-2 b/b, HPA-3 b/b, HPA-4 a/b and HPA-5 b/b. The blood group O HPA gene patterns had their highest values (HPA-5 b/b), (HPA-4 a/a) and (HPA-3 b/b) and the least was (HPA-1 a/b), while for the blood group O , the highest was observed for HPA-3 b/b and HPA-5 b/b and the least for HPA-1 a/a and a/b, HPA-2 a/b and b/b, and HPA-4 a/b and b/b.","PeriodicalId":13659,"journal":{"name":"International Blood Research & Reviews","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2021-05-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Assessment of Gene Frequencies of Human Platelet Alloantigens in Rivers-State, Nigeria Based on ABO/Rhesus Blood Groups Distribution\",\"authors\":\"J. E. Wenah-Emmanuel, E. Eze, E. O. Nwachuku, E. Wenah, Z. Jeremiah\",\"doi\":\"10.9734/IBRR/2021/V12I330152\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Aim: The aim of this study was to assess the Gene Frequencies of Human Platelet Alloantigens in Rivers-State, Nigeria based on ABO/Rhesus blood groups distribution Study Design: A randomized controlled trial. Place and Duration of Study: Rivers State University Medical Centre, Port Harcourt, Safety Molecular Pathology Laboratory, Enugu State, Justcare clinical laboratory Port Harcourt Rivers State and University of Port Harcourt Teaching Hospital, between October 2019 and March 2020. Methodology: The subjects consisted of apparently healthy individuals who were of Rivers State origin totaling 104 persons aged 17 to 42 years. They were under-graduate and post graduate students of Rivers State University of Port Harcourt. Five major ethnic groups were considered which included Ikwerre, Ogoni, Ijaw, Etche and Ogba. Their demographic information was collected using a sample register and a questionnaire. Samples were collected from the antecubital vein. 10ml of blood was collected, 5ml was transferred into EDTA sample bottle (Ethylene diamine tetracetic acid) while 2ml was dispensed into plain bottle and labeled accordingly. Serological testing Original Research Article Wenah-Emmanuel et al.; IBRR, 12(3): 23-31, 2021; Article no.IBRR.68552 24 including HIV (RVS) screening, HBsag, HCV and VDRL were all as part of the inclusion criteria immediately after samples were collected. The remaining sample was analyzed using genotyping of Human Platelet Antigens by High Resolution Melting Curve Analysis Polymerase Chain Reaction (HRM-PCR), while tile method also known as forward/cell grouping method which is based on haem-agglutination reaction was used for ABO/Rh blood grouping. The melt curve analysis was done using the MicPCR software while the frequency analysis was done using Number Cruncher Statistical Software (NCSS) Version 13. GraphPad Prism Version 8.0.2 was used to determine the statistical significance between the various HPA genotypes and the ethnic groups and p-values of < 0.05 were considered to be statistically significant. Results were presented in percentages, mean+/standard deviation and in tables Results: The results showed that the A blood group had highest frequencies of 19.2% and 17.7% for HPA-5 b/b and HPA-4 a/a, while the least was 0.8% each for HPA-3 a/a, HPA-4 b/b and HPA-5. For blood group B, the highest were 20.0% (HPA-5 b/b) and 16.7% (HPA-3 b/b), and the least were 5.0% each for HPA-1 b/b and HPA-4 a/b, while blood group B had highest frequencies for HPA-1 a/a, HPA-2 b/b, HPA-3 b/b, HPA-4 a/b and HPA-5 b/b (20.0% each). The blood group O + HPA gene patterns had their highest values at 19.7% (HPA-5 b/b), 16.5% (HPA-4 a/a) and 13.7% (HPA-3 b/b) and the least was 7.9% (HPA-1 a/b), while for the blood group O , the highest was observed for HPA-3 b/b and HPA-5 b/b (20.0% each) and the least for HPA-1 a/a and a/b, HPA-2 a/b and b/b, and HPA-4 a/b and b/b (10.0% each). Conclusion: Based on the results, we conclude that A blood group had highest HPA frequencies. Whilst, the highest for blood group B were (HPA-5 b/b) and (HPA-3 b/b), and blood group B had highest frequencies for HPA-1 a/a, HPA-2 b/b, HPA-3 b/b, HPA-4 a/b and HPA-5 b/b. The blood group O HPA gene patterns had their highest values (HPA-5 b/b), (HPA-4 a/a) and (HPA-3 b/b) and the least was (HPA-1 a/b), while for the blood group O , the highest was observed for HPA-3 b/b and HPA-5 b/b and the least for HPA-1 a/a and a/b, HPA-2 a/b and b/b, and HPA-4 a/b and b/b.\",\"PeriodicalId\":13659,\"journal\":{\"name\":\"International Blood Research & Reviews\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2021-05-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Blood Research & Reviews\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.9734/IBRR/2021/V12I330152\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Blood Research & Reviews","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.9734/IBRR/2021/V12I330152","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
目的:本研究的目的是基于ABO/恒河猴血型分布来评估尼日利亚Rivers-State地区人类血小板异体抗原的基因频率。学习地点和时间:2019年10月至2020年3月期间,河流州立大学医学中心,哈科特港,安全分子病理学实验室,埃努古州,Justcare临床实验室哈科特港河州和哈科特港教学医院大学。方法:研究对象由表面健康的河流州人组成,共104人,年龄在17至42岁之间。他们是哈科特港河河州立大学的本科生和研究生。考虑了五个主要民族,包括伊克维尔、奥戈尼、伊贾、埃切和奥格巴。他们的人口统计信息是通过抽样登记和问卷收集的。从肘前静脉采集样本。取血10ml,取5ml入EDTA样品瓶(乙二胺四乙酸),取2ml入普通瓶并贴上标签。原研究文章Wenah-Emmanuel et al;中国生物医学工程学报,12(3):23-31,2021;文章no.IBRR。68552 24包括HIV (RVS)筛查、HBsag、HCV和VDRL均在样本采集后立即作为纳入标准的一部分。剩余样本采用高分辨率熔融曲线聚合酶链式反应(HRM-PCR)对人血小板抗原进行基因分型,ABO/Rh血型分型采用基于血凝反应的正向/细胞分型法。熔融曲线分析使用MicPCR软件完成,频率分析使用Number Cruncher Statistical software (NCSS) Version 13完成。采用GraphPad Prism Version 8.0.2检测各HPA基因型与民族间的差异,p值< 0.05为差异有统计学意义。结果以百分比、平均值+/标准差和表的形式表示。结果:A血型HPA-5 A /b和HPA-4 A / A的发生率最高,分别为19.2%和17.7%,HPA-3 A / A、HPA-4 b/b和HPA-5的发生率最低,各为0.8%。B血型中HPA-5 B / B和HPA-3 B / B发生率最高,分别为20.0%和16.7%,HPA-1 B / B和HPA-4 a/ B发生率最低,各为5.0%,而HPA-1 a/a、HPA-2 B / B、HPA-3 B / B、HPA-4 a/ B和HPA-5 B / B发生率最高,各为20.0%。O型血HPA +基因型最高为19.7% (HPA-5 b/b)、16.5% (HPA-4 a/a)和13.7% (HPA-3 b/b),最低为7.9% (HPA-1 a/b),而O型血HPA-3 b/b和HPA-5 b/b最高(各20.0%),HPA-1 a/a和a/b、HPA-2 a/b和b/b、HPA-4 a/b和b/b最低(各10.0%)。结论:A血型的HPA频率最高。B型血中HPA-5 B / B和HPA-3 B / B频率最高,HPA-1 a/a、HPA-2 B / B、HPA-3 B / B、HPA-4 a/ B和HPA-5 B / B频率最高。O型血HPA基因型最高(HPA-5 b/b)、(HPA-4 a/a)和(HPA-3 b/b),最低(HPA-1 a/b), O型血HPA-3 b/b和HPA-5 b/b最高,HPA-1 a/a和a/b、HPA-2 a/b和b/b、HPA-4 a/b和b/b最低。
Assessment of Gene Frequencies of Human Platelet Alloantigens in Rivers-State, Nigeria Based on ABO/Rhesus Blood Groups Distribution
Aim: The aim of this study was to assess the Gene Frequencies of Human Platelet Alloantigens in Rivers-State, Nigeria based on ABO/Rhesus blood groups distribution Study Design: A randomized controlled trial. Place and Duration of Study: Rivers State University Medical Centre, Port Harcourt, Safety Molecular Pathology Laboratory, Enugu State, Justcare clinical laboratory Port Harcourt Rivers State and University of Port Harcourt Teaching Hospital, between October 2019 and March 2020. Methodology: The subjects consisted of apparently healthy individuals who were of Rivers State origin totaling 104 persons aged 17 to 42 years. They were under-graduate and post graduate students of Rivers State University of Port Harcourt. Five major ethnic groups were considered which included Ikwerre, Ogoni, Ijaw, Etche and Ogba. Their demographic information was collected using a sample register and a questionnaire. Samples were collected from the antecubital vein. 10ml of blood was collected, 5ml was transferred into EDTA sample bottle (Ethylene diamine tetracetic acid) while 2ml was dispensed into plain bottle and labeled accordingly. Serological testing Original Research Article Wenah-Emmanuel et al.; IBRR, 12(3): 23-31, 2021; Article no.IBRR.68552 24 including HIV (RVS) screening, HBsag, HCV and VDRL were all as part of the inclusion criteria immediately after samples were collected. The remaining sample was analyzed using genotyping of Human Platelet Antigens by High Resolution Melting Curve Analysis Polymerase Chain Reaction (HRM-PCR), while tile method also known as forward/cell grouping method which is based on haem-agglutination reaction was used for ABO/Rh blood grouping. The melt curve analysis was done using the MicPCR software while the frequency analysis was done using Number Cruncher Statistical Software (NCSS) Version 13. GraphPad Prism Version 8.0.2 was used to determine the statistical significance between the various HPA genotypes and the ethnic groups and p-values of < 0.05 were considered to be statistically significant. Results were presented in percentages, mean+/standard deviation and in tables Results: The results showed that the A blood group had highest frequencies of 19.2% and 17.7% for HPA-5 b/b and HPA-4 a/a, while the least was 0.8% each for HPA-3 a/a, HPA-4 b/b and HPA-5. For blood group B, the highest were 20.0% (HPA-5 b/b) and 16.7% (HPA-3 b/b), and the least were 5.0% each for HPA-1 b/b and HPA-4 a/b, while blood group B had highest frequencies for HPA-1 a/a, HPA-2 b/b, HPA-3 b/b, HPA-4 a/b and HPA-5 b/b (20.0% each). The blood group O + HPA gene patterns had their highest values at 19.7% (HPA-5 b/b), 16.5% (HPA-4 a/a) and 13.7% (HPA-3 b/b) and the least was 7.9% (HPA-1 a/b), while for the blood group O , the highest was observed for HPA-3 b/b and HPA-5 b/b (20.0% each) and the least for HPA-1 a/a and a/b, HPA-2 a/b and b/b, and HPA-4 a/b and b/b (10.0% each). Conclusion: Based on the results, we conclude that A blood group had highest HPA frequencies. Whilst, the highest for blood group B were (HPA-5 b/b) and (HPA-3 b/b), and blood group B had highest frequencies for HPA-1 a/a, HPA-2 b/b, HPA-3 b/b, HPA-4 a/b and HPA-5 b/b. The blood group O HPA gene patterns had their highest values (HPA-5 b/b), (HPA-4 a/a) and (HPA-3 b/b) and the least was (HPA-1 a/b), while for the blood group O , the highest was observed for HPA-3 b/b and HPA-5 b/b and the least for HPA-1 a/a and a/b, HPA-2 a/b and b/b, and HPA-4 a/b and b/b.