{"title":"基于卷积神经网络的冠状动脉粥样硬化斑块组成表征","authors":"Yifan Yin, Chunliu He, Biao Xu, Zhiyong Li","doi":"10.32604/MCB.2019.05732","DOIUrl":null,"url":null,"abstract":"The tissue composition and morphological structure of atherosclerotic plaques determine its stability or vulnerability. Intravascular optical coherence tomography (IVOCT) has rapidly become the method of choice for assessing the pathology of the coronary arterial wall in vivo due to its superior resolution. However, in clinical practice, the analysis of plaque composition of OCT images mainly relies on the interpretation of images by well-trained experts, which is a time-consuming, labor-intensive procedure and it is also subjective. The purpose of this study is to use the Convolutional neural network (CNN) method to automatically extract the best feature information from the OCT images to characterize the three basic components of atherosclerotic plaque (fibrous, lipid, and calcification). This study selected the OCT images of 20 patients from Nanjing Drum Tower Hospital from 2015.12 to 2016.12. The OCT-reading expert first excluded the images containing the brackets, and then divided all the remaining images, resulting in 1500 plaque OCT images. The expert labeled plaque composition in each image, cutting it into 11*11 image patches and obtained 87390 patches. 75000 of them were set as training examples and the others were set for testing. The classification accuracy of the test set served as the evaluation criterion. The experimental results show that the average classification accuracy of the fibrous, calcification, and lipid patches by the CNN classifier was over 75%, especially to characterize the fibrous patches, whose accuracy could reach more than 80%. The proposed method is effective and robust in the analysis of atherosclerotic plaque composition in coronary OCT images, providing a base for further segmentation study.","PeriodicalId":48719,"journal":{"name":"Molecular & Cellular Biomechanics","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2019-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Characterization of Coronary Atherosclerotic Plaque Composition Based on Convolutional Neural Network (CNN)\",\"authors\":\"Yifan Yin, Chunliu He, Biao Xu, Zhiyong Li\",\"doi\":\"10.32604/MCB.2019.05732\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The tissue composition and morphological structure of atherosclerotic plaques determine its stability or vulnerability. Intravascular optical coherence tomography (IVOCT) has rapidly become the method of choice for assessing the pathology of the coronary arterial wall in vivo due to its superior resolution. However, in clinical practice, the analysis of plaque composition of OCT images mainly relies on the interpretation of images by well-trained experts, which is a time-consuming, labor-intensive procedure and it is also subjective. The purpose of this study is to use the Convolutional neural network (CNN) method to automatically extract the best feature information from the OCT images to characterize the three basic components of atherosclerotic plaque (fibrous, lipid, and calcification). This study selected the OCT images of 20 patients from Nanjing Drum Tower Hospital from 2015.12 to 2016.12. The OCT-reading expert first excluded the images containing the brackets, and then divided all the remaining images, resulting in 1500 plaque OCT images. The expert labeled plaque composition in each image, cutting it into 11*11 image patches and obtained 87390 patches. 75000 of them were set as training examples and the others were set for testing. The classification accuracy of the test set served as the evaluation criterion. The experimental results show that the average classification accuracy of the fibrous, calcification, and lipid patches by the CNN classifier was over 75%, especially to characterize the fibrous patches, whose accuracy could reach more than 80%. The proposed method is effective and robust in the analysis of atherosclerotic plaque composition in coronary OCT images, providing a base for further segmentation study.\",\"PeriodicalId\":48719,\"journal\":{\"name\":\"Molecular & Cellular Biomechanics\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2019-02-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Molecular & Cellular Biomechanics\",\"FirstCategoryId\":\"1087\",\"ListUrlMain\":\"https://doi.org/10.32604/MCB.2019.05732\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"Biochemistry, Genetics and Molecular Biology\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Molecular & Cellular Biomechanics","FirstCategoryId":"1087","ListUrlMain":"https://doi.org/10.32604/MCB.2019.05732","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
Characterization of Coronary Atherosclerotic Plaque Composition Based on Convolutional Neural Network (CNN)
The tissue composition and morphological structure of atherosclerotic plaques determine its stability or vulnerability. Intravascular optical coherence tomography (IVOCT) has rapidly become the method of choice for assessing the pathology of the coronary arterial wall in vivo due to its superior resolution. However, in clinical practice, the analysis of plaque composition of OCT images mainly relies on the interpretation of images by well-trained experts, which is a time-consuming, labor-intensive procedure and it is also subjective. The purpose of this study is to use the Convolutional neural network (CNN) method to automatically extract the best feature information from the OCT images to characterize the three basic components of atherosclerotic plaque (fibrous, lipid, and calcification). This study selected the OCT images of 20 patients from Nanjing Drum Tower Hospital from 2015.12 to 2016.12. The OCT-reading expert first excluded the images containing the brackets, and then divided all the remaining images, resulting in 1500 plaque OCT images. The expert labeled plaque composition in each image, cutting it into 11*11 image patches and obtained 87390 patches. 75000 of them were set as training examples and the others were set for testing. The classification accuracy of the test set served as the evaluation criterion. The experimental results show that the average classification accuracy of the fibrous, calcification, and lipid patches by the CNN classifier was over 75%, especially to characterize the fibrous patches, whose accuracy could reach more than 80%. The proposed method is effective and robust in the analysis of atherosclerotic plaque composition in coronary OCT images, providing a base for further segmentation study.
期刊介绍:
The field of biomechanics concerns with motion, deformation, and forces in biological systems. With the explosive progress in molecular biology, genomic engineering, bioimaging, and nanotechnology, there will be an ever-increasing generation of knowledge and information concerning the mechanobiology of genes, proteins, cells, tissues, and organs. Such information will bring new diagnostic tools, new therapeutic approaches, and new knowledge on ourselves and our interactions with our environment. It becomes apparent that biomechanics focusing on molecules, cells as well as tissues and organs is an important aspect of modern biomedical sciences. The aims of this journal are to facilitate the studies of the mechanics of biomolecules (including proteins, genes, cytoskeletons, etc.), cells (and their interactions with extracellular matrix), tissues and organs, the development of relevant advanced mathematical methods, and the discovery of biological secrets. As science concerns only with relative truth, we seek ideas that are state-of-the-art, which may be controversial, but stimulate and promote new ideas, new techniques, and new applications.