D. P. Saputra, N. P. Susanti
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引用次数: 9

摘要

动脉粥样硬化是一种慢性炎症性疾病,始于内皮功能障碍,导致动脉内壁斑块生长。内皮功能障碍导致内皮活化NF-?B导致促炎基因转录,支持动脉粥样硬化斑块的生长。紫甘薯花青素是一种已知的化合物,具有抑制炎症过程的活性。紫甘薯中主要的花青素是花青素和芍药苷。根据花青素和芍药苷对NF-?的相互作用,对动脉粥样硬化进行抗炎活性试验。B蛋白用分子对接法在硅片上进行。本研究的主要阶段是建立NF-?B、应用Chimera1.10.1进行蛋白制备,应用HyperChem8制备并优化花青素与芍药苷的三维结构,验证花青素与芍药苷在NF-?B蛋白应用Autodock4.2。结果表明,氰胺和芍药苷具有亲和力,并与NF-?B蛋白。氰胺和吡啶之间的键能与NF-?B蛋白为-7.92 kcal/mol和-7.86 kcal/mol,它们与与天然配体相等的结合位点上的LEU472氨基酸形成氢键。花青素和牡丹碱具有抗动脉粥样硬化的潜在活性,因为它们与NF-?B蛋白,从而阻止炎症过程中动脉粥样硬化斑块的形成。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Molecular Docking Sianidin dan Peonidin sebagai Antiinflamasi pada Aterosklerosis Secara In Silico
Atherosclerosis is a chronic inflammatory disease that begins with endothelial dysfunction resulting in plaque growth in the inner walls of the arteries. Endothelial dysfunction causes endothelial activates NF-?B resulting in a transcription of proinflammatory gene supporting the growth of atherosclerotic plaque. The purple sweet potato anthocyanin is a compound known to have activity inhibiting the inflammatory process. The major anthocyanins contained in purple sweetpotato are cyanidine and peonidine. The cyanidine and peonidin activity test was performed as antiinflammatory at atherosclerosis based on their interaction on NF-?B protein using molecular docking method in silico. The stages of this research are preparation of protein structure database of NF-?B, protein preparation using Chimera1.10.1 application, preparation and optimization of cyanidin and peonidin 3D structure using HyperChem8 application, and validation of molecular docking and docking method of cyanidin and peonidin on NF-?B protein using application Autodock4.2. The results showed that cyanidine and peonidine had affinity and formed a hydrogen bond with the NF-?B protein. The bond energy between cyanidine and peonidine with the NF-?B protein is -7.92 kcal/mol and -7.86 kcal/mol which together form the hydrogen bond with the LEU472 amino acid on the binding site equal to the native ligand. Cyanidin and peonidine have the potential of activity as antiatherosklerosis because it has an affinity with the NF-?B protein so that it prevents the inflammatory process in the formation of atherosclerotic plaque.
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