利用srap分子标记对马尔瓦树进行比较研究及遗传多样性分析

IF 2.1 4区 生物学 Q2 Agricultural and Biological Sciences
Syamand A. Qadir, Chnar Hama noori Meerza, A. Faraj, Kawa Khwarahm Hamafaraj, S. Tobakari, S. Hamarashid
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引用次数: 0

摘要

Malva属有25-40种,它可以被认为是一年生和/或两年生草本植物。国家卫生部将其列为具有愈合和镇痛作用的药用植物。本研究旨在分析70份马尔瓦(Malva)种质资源的SRAP (Sequence-related amplified polymorphism,序列相关扩增多态性)标记,其中包括5份马尔瓦(Malva nigecta Wallr)。, Malva pusilla Sm。Malva sylvestris L., Malva verticillata L., Malva nicaeensis ..通过聚合酶链反应扩增(PCR),对5种麻属植物共扩增出89条(NTL) DNA条带。这些条带由5条选择性引物组合而成。扩增片段总数在10 ~ 27个之间。预测的无偏基因多样性(UHe)在0.077 ~ 0.382之间。三个物种之间的遗传相似性估计在0.70到0.91之间。邻居加入树的结果显示了两个主要的聚类。根据SRAP (Sequence-related amplified polymorphism,序列相关扩增多态性)标记分析,pusilla和Malva aegyptia的相似性最低。结果表明,所有分析的基因型均具有较高的分子识别度,表明马尔瓦种质间存在大量的遗传多样性。本研究的目的是;A)估计遗传多样性;b)使用NJ方法评估人口关系。目前的研究结果对育种和保护计划具有启示意义。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Comparative study and genetic diversity in Malva using srap molecular markers
The Malva genus has 25-40 species and it can be considered as an annual and/or biannual herb. Malva species are indicated with potential therapeutic as cicatrizing and analgesic by the Ministry of Health. The aim of this study was to analyze SRAP (Sequence-related amplified polymorphism) markers in a total of 70 accessions of Malva species, which included five species Malva neglecta Wallr., Malva pusilla Sm., Malva sylvestris L., Malva verticillata L., Malva nicaeensis All.. A total of 89 (Number of total loci) (NTL) DNA bands were produced through polymerase chain reaction amplifications (PCR) amplification of five Malva species. These bands were produced with the combinations of 5 selective primers. The total number of amplified fragments ranged from 10 to 27. The predicted unbiased gene diversity (UHe) varied between 0.077 (Malva sylvestris) and 0.382 (Malva pusilla). The genetic similarities between three species are estimated from 0.70 to 0.91. Neighbor-Joining tree results showed two major clusters. According to the SRAP (Sequence-related amplified polymorphism) markers analysis, Malva pusilla and Malva aegyptia had the lowest similarity. Our results provided great molecular identification of all assayed genotypes, which have shown that there is large quantity of genetic diversity among the Malva accessions. Objectives of the study were; a) to estimate genetic diversity; b) to evaluate population relationships using NJ approaches. Current results have implications in breeding and conservation programs.
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来源期刊
Caryologia
Caryologia 生物-遗传学
CiteScore
1.60
自引率
23.80%
发文量
26
审稿时长
12 months
期刊介绍: Caryologia is devoted to the publication of original papers, and occasionally of reviews, about plant, animal and human karyological, cytological, cytogenetic, embryological and ultrastructural studies. Articles about the structure, the organization and the biological events relating to DNA and chromatin organization in eukaryotic cells are considered. Caryologia has a strong tradition in plant and animal cytosystematics and in cytotoxicology. Bioinformatics articles may be considered, but only if they have an emphasis on the relationship between the nucleus and cytoplasm and/or the structural organization of the eukaryotic cell.
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