在野外进行快速成像,然后进行摄影测量,以数字方式捕捉植物标本丢失的尺寸。

IF 2.7 3区 生物学 Q2 PLANT SCIENCES
Nicole James, Alex Adkinson, Austin Mast
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引用次数: 0

摘要

前提:我们认识到,为了三维(3D)建模的目的,在采集植物标本时需要一个定制的成像协议,并且缺乏一个广泛适用的摄影测量协议,该协议涵盖了植物标本几何形状的异质性和枯萎等过程带来的挑战。方法和结果:我们制定了一份设备清单和一套详细的协议,描述了如何在植物标本变形之前(例如,通过按压)在现场捕捉植物标本的图像,以及如何在Agisoft Metashape Professional中从图像集生成3D模型。结论:设备清单和协议是可以对样本几何形状超出了所考虑的六种类型的范围,对于那些以前没有使用过它的人来说,这是一个很容易进入摄影测量的方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Rapid imaging in the field followed by photogrammetry digitally captures the otherwise lost dimensions of plant specimens

Rapid imaging in the field followed by photogrammetry digitally captures the otherwise lost dimensions of plant specimens

Premise

We recognized the need for a customized imaging protocol for plant specimens at the time of collection for the purpose of three-dimensional (3D) modeling, as well as the lack of a broadly applicable photogrammetry protocol that encompasses the heterogeneity of plant specimen geometries and the challenges introduced by processes such as wilting.

Methods and Results

We developed an equipment list and set of detailed protocols describing how to capture images of plant specimens in the field prior to their deformation (e.g., with pressing) and how to produce a 3D model from the image sets in Agisoft Metashape Professional.

Conclusions

The equipment list and protocols represent a foundation on which additional improvements can be made for specimen geometries outside of the range of the six types considered, and an easy entry into photogrammetry for those who have not previously used it.

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来源期刊
CiteScore
7.30
自引率
0.00%
发文量
50
审稿时长
12 weeks
期刊介绍: Applications in Plant Sciences (APPS) is a monthly, peer-reviewed, open access journal promoting the rapid dissemination of newly developed, innovative tools and protocols in all areas of the plant sciences, including genetics, structure, function, development, evolution, systematics, and ecology. Given the rapid progress today in technology and its application in the plant sciences, the goal of APPS is to foster communication within the plant science community to advance scientific research. APPS is a publication of the Botanical Society of America, originating in 2009 as the American Journal of Botany''s online-only section, AJB Primer Notes & Protocols in the Plant Sciences. APPS publishes the following types of articles: (1) Protocol Notes describe new methods and technological advancements; (2) Genomic Resources Articles characterize the development and demonstrate the usefulness of newly developed genomic resources, including transcriptomes; (3) Software Notes detail new software applications; (4) Application Articles illustrate the application of a new protocol, method, or software application within the context of a larger study; (5) Review Articles evaluate available techniques, methods, or protocols; (6) Primer Notes report novel genetic markers with evidence of wide applicability.
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